Pelagibacterium nitratireducens: V6617_02860
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Entry
V6617_02860 CDS
T11031
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6617_02860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnf03400
]
V6617_02860
Enzymes [BR:
pnf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
V6617_02860
DNA repair and recombination proteins [BR:
pnf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6617_02860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WWT33424
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All DBs
Position
complement(544659..545318)
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AA seq
219 aa
AA seq
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MSALATPARLDSAQALAAHLEGLSQRDQRLAAAISRAGEITLRTSPSGFEGMARIVCGQQ
LSVASARAIWGRVEALGAITPDAYLGFDEQTLRKTGLSRGKFETIRGVALAITEQGLDFS
QVDVMDPDDAIETLTRLKGIGPWTAEIYLLFCAGHPDIFPAGDLALQKAVEHAFDLPARP
LPKDLIPLAAQWSPHRGAAALMFWRYFSAMKNSDAWDAL
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcccttgccactccagcccggctcgacagcgcccaggcgctcgccgctcatctc
gagggattaagccagcgcgatcaacgccttgccgctgccataagccgggcgggcgagatc
accctgcgcacctcgccatccggttttgagggcatggcccgtatcgtttgcggccagcag
ctctcggtcgcttccgcccgcgccatctggggccgggtcgaggcactgggcgccataacc
ccggacgcatatctcgggttcgacgaacagaccctacggaaaaccgggctttcgcggggg
aaattcgaaacgattcgcggcgtcgccctcgccatcaccgagcagggattggacttttcc
caggttgatgtgatggatcccgacgacgccatcgagaccctcacccgcctcaagggcatc
ggcccctggactgccgagatttatctcctgttctgcgccggccaccccgacatctttccc
gccggcgaccttgccctgcaaaaggccgtcgaacacgctttcgatcttcccgcgcgcccg
ctgcccaaggacttgatccccctggccgcccaatggtcaccgcatcggggcgccgcagcc
ctgatgttctggcgctatttctcggccatgaaaaactccgacgcctgggacgccctctga
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