Pelagibacterium nitratireducens: V6617_04025
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Entry
V6617_04025 CDS
T11031
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02010
ABC transporters
pnf02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6617_04025
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
V6617_04025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_04025
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
V6617_04025
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
HEM4
3HCDH
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
WWT33638
LinkDB
All DBs
Position
complement(773783..774736)
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AA seq
317 aa
AA seq
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MKYLSMFTLLSVAALAAAAPALGQEEQKVMAVSIPAATHGWTGGVVYHAEAAAAEIREAF
PNIDVVVNTSPSAIAQVGALEDLQASRDPDALVILPFTSEELTGPVETVKNAGTFITVVD
RGLTDPSIQDLYVAGDNVAVGANTANWLSEQLGGEGDVVVLRGIPTVIDDERIQGFQDAL
EGTNINILDVQYANWNRDEAFNLMQDYLAKYSHIDAVWANDDDMLLGVLEAIDQAGRDDI
KFALGANGMVDIVEMVRAGDPRTPISTPYPPSMIKTAMYLTAANLNGQAPVRGEVILDAP
LITIDNADEFYFPDSPF
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttgagtatgttcacactgctcagtgtcgctgcgcttgccgcggcggcacca
gcccttggccaggaggagcaaaaggtcatggccgtttccattccggccgcgacacacggc
tggactggcggcgttgtctatcatgccgaagcggctgccgcggaaatccgcgaggccttt
cccaatatcgacgtcgtcgtgaacacctcgccctcggccatcgcccaggtcggtgcgctc
gaagatctgcaggcctcacgcgatcccgatgcgctggtcatcctgcccttcacgtccgag
gagctcaccggccccgtcgaaacggtcaagaacgcaggcaccttcataaccgtcgtcgat
cgtggtctgaccgatcccagcatacaggatctctatgtcgccggtgacaatgtcgccgtg
ggcgcaaacaccgccaactggctctccgaacaactgggcggagaaggcgacgtggtcgtt
cttcgcggcattcccaccgtcatcgatgacgaacgcattcagggcttccaggatgccctt
gagggcaccaacatcaacatcctcgacgtccagtacgccaactggaatcgcgatgaagcg
ttcaatctgatgcaggactatcttgccaaatattcccatatcgatgcggtctgggccaat
gatgacgacatgctgctcggcgtgctcgaagccatcgaccaggccggccgcgacgacatc
aaattcgcgctcggtgccaatggtatggtcgatattgtcgagatggtccgggccggagat
ccgcgcacgccgatctcgaccccttatccgccctcgatgatcaagacggccatgtatctg
accgccgccaatctcaatggtcaggcaccggtacgtggggaggtcatcctcgatgccccg
ctgatcaccatcgacaatgccgacgagttctatttccctgactcgccgttctga
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