Pelagibacterium nitratireducens: V6617_04610
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Entry
V6617_04610 CDS
T11031
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V6617_04610 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnf03400
]
V6617_04610 (ruvB)
Enzymes [BR:
pnf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6617_04610 (ruvB)
DNA repair and recombination proteins [BR:
pnf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V6617_04610 (ruvB)
RecFOR pathway proteins
V6617_04610 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_16
AAA_22
AAA_3
AAA_18
nSTAND3
Rad17
AAA_2
AAA_14
AAA_17
NTPase_1
TsaE
AAA_24
AAA_33
RNA_helicase
ABC_tran
Bac_DnaA
NB-ARC
AAA_28
NACHT
Sigma54_activ_2
AAA_7
IstB_IS21
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
WWT33748
LinkDB
All DBs
Position
899723..900763
Genome browser
AA seq
346 aa
AA seq
DB search
MTDLTNAAEGRDDSLDVSLRPSGFSEFIGQEAARANLQVFIEAAKQRQAALDHVLFVGPP
GLGKTTLAQIISRELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAVEE
ILYPAMEDFQLDLIIGEGPAARSVRIDLAKFTLVGATTRAGLLTTPLRDRFGIPVRLNFY
TPQELVQIVERGARLMGMAMTSDGALEVARRSRGTPRIAGRLLRRVTDFALVEGAAEINR
KVADKALLRLDVDARGLDQLDRRYLTTIAEFYGGGPVGIETISAALSEPRDAIEEIVEPY
LIQQGFIQRTPRGRMMTALSFQHMGYAVPQGFAGLQASLFEEESGE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcaccaatgccgctgaaggccgcgacgacagtctcgatgtttccctgcgc
ccctcggggttttccgagtttatcgggcaggaggcggcgcgcgccaatctgcaggtgttc
atcgaagccgcaaagcagcggcaggcggcacttgatcatgtgttgttcgtcggcccgcca
gggctgggcaagaccacgctcgcccagatcatttcgcgcgagcttggcgtaggctttcgc
gccacgtccggtccggtcatcgccaaggcgggggatctggccgcgcttttgaccaatctc
gaagagcgcgacgtcttgttcatcgacgaaatccaccgtctcagcccggcggtcgaggaa
attctctatccggcgatggaggatttccagctcgatctgatcatcggggagggcccggcg
gcgcgctcggtgcggatcgatctggccaagttcacccttgtgggcgcaacgacccgggcc
ggacttttgaccacacccttgcgcgaccggttcggcattccggtgcgattgaatttttac
acgccccaagagctggtccagatcgtcgagcgcggtgcgcggctgatgggcatggccatg
acctcggacggcgcgctggaagtcgctcgccgctcgcgcggcacgccgcgcattgcgggg
cgtctgttgcgccgggtcaccgatttcgcgcttgtcgagggtgcggccgagatcaaccgc
aaggtcgccgacaaggcgctgttgcggctcgatgtcgatgccagggggctcgatcagctc
gaccggcgctatcttacgacaattgccgaattttatggcggcgggccggtcggcatcgaa
accatttcggccgcgctgtccgaaccgcgcgatgccatcgaggaaatcgttgagccctat
ctcatccagcaggggttcatccagcgcaccccgcgtggacggatgatgacggcgctctct
ttccagcacatgggctatgccgtcccgcagggctttgccggcctgcaggcgagcctgttc
gaggaggagagcggggagtga
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