Pelagibacterium nitratireducens: V6617_05020
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Entry
V6617_05020 CDS
T11031
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6617_05020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_05020
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
V6617_05020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WWT33822
LinkDB
All DBs
Position
complement(986475..988460)
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AA seq
661 aa
AA seq
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MIKKPTIAIMAGYLAATALTAVPAVPALAQDTPAAQCSSYSQAPQLADRVAAGELPAVDE
RLPLHPLVIEPADEIGVYGGEFQDRWGGGRIADMRHYGYEPLVRWSVDGSEVIPGVAEGW
DVSEDATTYTFHLREGMKWSDGEDFTADDIRYWWENVETNEKINPRGPRDIFVVNGEPMT
LTVIDDYTVEMSWSQPYGLLLQQLATPYGQRVVMFPEHYVSQFDIDLNPEGVAEMMEEDG
ETDYTAWWRANVGSYDDAAQFNDPERPSVIAWIPTEPYADKQRFSFVRNPYYFKVDPECQ
QLPYLDAHTWTLSQDAEVDLLAALQGDVSMSGRNVSIPQNRAVFVDGQEQGDYRLVTADT
CDFNTAIVWFSMNHPNETKAEVFQNHDFRAGLSLAINRPEIIDVVYLGQGEPFQAAPLPN
SPFYNEQLATQYTEFDMDQANEYLDRVMSERGEDGMRLGPDGEPFSFRVGINADFKPDTV
DVFQLVERTWREAGVDVTMDYRANDLHGTYVNDPERDAVVWVGENGCGQLPLLNASRLIN
DGGTTQWGNWDNWRAWDQERLGVTVDVPEGTEPVEPPANIARLYELRAMIPTTVGDEQTD
LMNEFNDLLAEEFLAIGIATPGGFYRSVDNDIHNVPQPLIEGWYYPGPAPANFEAFFYRE
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaaaccgactatagccattatggcgggctatctcgccgccaccgcgttgacg
gcagttccggcggttccggcactggcgcaggatacgccggccgcacaatgctccagctat
tcccaggcgccccagctcgccgatcgggtggccgcgggtgagttgcctgccgttgacgaa
cgccttccgctccacccgctggtgatcgagccggccgacgaaatcggcgtctatggcggc
gagttccaggatcgctggggcggcggccgcatcgccgacatgcgccattacggctatgag
ccgctggtgcgctggagtgtcgatggctcggaagtcattcccggcgtcgcagaaggctgg
gacgtctcggaagacgccacaacctataccttccatctgcgtgaaggcatgaaatggtcc
gacggcgaggacttcaccgccgacgatatccgctactggtgggaaaacgtcgagaccaac
gaaaagatcaacccccgcggtccgcgtgatatcttcgtggtcaacggcgagcccatgacc
ctcactgtcatcgacgactacacagtggaaatgagctggtcccagccctacggcctcctg
ctccagcagcttgccaccccttacggccagcgcgtcgtgatgttccctgagcactacgtt
tcccagttcgacatcgacctcaatcccgagggcgtagccgagatgatggaagaagacggc
gaaaccgactacaccgcctggtggcgcgccaatgtcggatcctatgacgacgctgcccag
ttcaacgatcccgagcgtccctcggtcatcgcctggatcccgaccgaaccttatgctgac
aagcagcgcttctcgttcgttcgcaacccttactacttcaaggtcgatcccgaatgccag
cagcttccctatctcgatgcccacacatggacgttgagccaggatgccgaagtcgatctg
cttgcagcgctccagggtgacgtttctatgtcgggacgtaacgtctcgatcccgcagaac
cgcgccgtgttcgtggacggtcaggaacagggcgattaccgcctggtcactgccgatacc
tgcgacttcaacacggccatcgtctggttctcgatgaaccatcctaacgagaccaaggcc
gaagtgttccagaaccacgatttccgcgccggcctttcgctcgccatcaatcgcccggaa
atcatcgacgtcgtctatctcggacagggcgaaccgttccaggccgctccgctgcccaac
tcgccgttctacaatgaacagctggctacccagtacaccgagttcgacatggaccaggcc
aacgagtatctcgacagggtcatgtccgagcgtggcgaggacggcatgcgtcttggtccc
gatggcgagcctttctcgttccgcgtgggcatcaatgccgacttcaagcccgacacggtc
gacgtgttccagcttgttgaacgcacatggcgcgaagctggcgtcgatgtgaccatggac
taccgcgccaacgacctgcacggcacctatgtcaatgatcccgaacgcgatgccgtggtc
tgggttggcgaaaacggctgtggccagcttccgctgctcaacgcctcgcggctgatcaat
gacggcggcaccacccagtggggcaattgggacaattggcgggcctgggaccaggagcgc
ctcggcgtgaccgtggacgttcccgaaggcaccgagccggtcgagccgccggccaatatc
gcccgcctttacgagctgcgcgccatgatcccgaccactgtcggtgacgagcagaccgat
ctgatgaacgaattcaacgaccttctggctgaagaattcctcgccatcggtatcgctacg
cctggcgggttctaccgctcggtggacaacgatatccacaacgtgccccagccgctgatc
gagggctggtactaccccggtccggcgcccgcaaactttgaagccttcttctaccgcgaa
gactaa
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