Pelagibacterium nitratireducens: V6617_05690
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Entry
V6617_05690 CDS
T11031
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K23169
UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase [EC:
6.3.2.53
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00550
Peptidoglycan biosynthesis
pnf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6617_05690 (murD)
Enzymes [BR:
pnf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.53 UDP-N-acetylmuramoyl-L-alanine---L-glutamate ligase
V6617_05690 (murD)
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Motif
Pfam:
Mur_ligase_M
MurD-like_N
Nitro_FeMo-Co
Motif
Other DBs
NCBI-ProteinID:
WWT33952
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Position
complement(1133748..1135034)
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AA seq
428 aa
AA seq
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MHIDGPVLLYGAGREARSTAAFLRRTYPELELFVTTDDGVAELEGASFITPQEANQVSRF
GTIVKSPGVSLYKPIFDTARAAGVKVTSNLNIWGAHFREGRTVVAISGTKGKSTTATLVH
LMLERSGVDVVLAGNVGIPPLDAADSAQTVVLELSSYQTADIDFAPDIAAISNLYPEHVD
WHGGLDAYYRDKLNLIAKGPKLVAIGPQAATVERVINTIPATTERIAALDIDLGDEILMA
AMNSRLKGAHNHDNARLAAAIALAAGATREGIFAGIEAFIPLPHRLEELMVGDILFVDDS
ISTTPEATKVALAAYKGKKIALIAGGHERQQDYTDLANLMGLTSVVMLCSLPVTGQRLAQ
AVRDNTPIPIAECSTLDEAMQALASAGHIFDTVILSPGAPSYNQFKNFEERGDRFKTLAR
QHFGRDNQ
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcacattgacggtcccgttcttctttacggcgctggccgcgaagcccgctcgacggca
gcgtttctgcgccgcacctatcctgagctcgaactgttcgtgaccaccgatgacggcgtc
gccgaactcgagggcgccagtttcatcacgccccaggaggcaaaccaggtctcgcgcttc
ggcaccatcgtcaaaagcccgggcgtatcgctctacaaaccgattttcgataccgcccgc
gccgctggggtcaaggtcacgtccaacctcaacatctggggcgcccatttccgcgagggc
cgcacagtggtcgcaatctcgggaaccaaaggcaaatcgacaacagccacgctggtccat
ctgatgctggaaaggtccggggtcgatgtggtgctggccggcaatgtgggcattcccccg
ctcgatgccgccgacagcgcgcagaccgtggtgctcgaactctcctcctaccagacagcc
gatatcgatttcgcccccgacatcgccgctatctccaacctttatcccgagcatgtggac
tggcatggggggctggacgcctattaccgcgacaagctcaacctgatcgccaagggccca
aagcttgtggctatcggcccgcaggccgctaccgtcgagcgcgtcatcaatacaattccc
gccacgaccgaacgtattgctgccctcgatatcgatcttggcgacgagatcctcatggcg
gcgatgaattcgcggctcaagggcgcccacaaccacgacaacgcgcggctggcagcggct
atcgctctcgctgccggagccacgcgcgagggcatatttgcaggcatcgaggccttcatt
cccctgccccacaggctcgaggaactgatggtcggcgacatcctgtttgtcgatgactcc
atttccacgacgccggaagccaccaaggtggcgctcgccgcctacaagggcaaaaagatc
gccctgattgccggagggcatgagcgccagcaggactataccgacctcgccaatctgatg
gggctgaccagcgtggtaatgttatgctcgctccctgtcaccggccagcggctggcccag
gccgttcgcgacaacacgccgatccccattgccgaatgctcgacgctggacgaagccatg
caggcgctcgccagtgccggccatatctttgatacggtgatcctttcgcccggagcgccc
agctacaaccagttcaagaacttcgaggagcgcggcgacagattcaagaccctcgcccgc
cagcatttcggccgggacaatcaatga
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