Pelagibacterium nitratireducens: V6617_08000
Help
Entry
V6617_08000 CDS
T11031
Symbol
xylF
Name
(GenBank) D-xylose ABC transporter substrate-binding protein
KO
K10543
D-xylose transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6617_08000 (xylF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_08000 (xylF)
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
D-Xylose transporter
V6617_08000 (xylF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_3
Motif
Other DBs
NCBI-ProteinID:
WWT34397
UniProt:
A0ABZ2I3L1
LinkDB
All DBs
Position
1598971..1600011
Genome browser
AA seq
346 aa
AA seq
DB search
MKTFAAALLGTTVLFGLAGGALAQDITVGVSWSNFQEERWKTDEAAIQAQLDEMGASYIS
ADAQSSASKQLTDIESLIAQGADALIVLAQDTDAIQPAIAAAVAEGIPVIGYDRLIENAD
AFYITFDNQGVGRLQAESVFAVQPTGNYVFIKGSSTDPNADFLHAGQLEVLQDAIDAGDI
VNVGEAYTDGWLPENAQANMEQFLTANNNEVDAVVASNDGTAGGAIAALAAQGLDGAVPV
SGQDGDHAALNRIALGTQTVSVWKDSRELGAKAAEIAVELAGGAALADIEGSVTFDGGPN
GVEMNSLFLAPVAITQDNLDVVIDAGWVSKDVVCQGVDAGSVAACD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcgcagctgcccttctgggcacgactgttcttttcggtctggccgggggc
gcactggctcaggacatcaccgttggcgtttcctggtccaacttccaggaagagcgctgg
aagaccgacgaggcagccatccaggctcagcttgatgaaatgggcgccagctacatttcc
gcagacgcgcagtcttcagcatccaagcagcttaccgatatcgaaagccttatcgctcag
ggcgccgatgcgctcatcgttctggctcaggataccgatgccatccagccggcaatcgcc
gccgcagtggcagagggcatcccggtgatcggctatgaccgcctcatcgaaaatgccgat
gcgttctacatcaccttcgacaaccagggtgttggccgcctgcaggctgaatcggtgttt
gccgtgcagccgaccggcaattacgtcttcatcaagggctcgagcaccgatcccaacgcg
gacttcctgcatgcgggtcagctcgaagtgcttcaggatgcgatcgacgccggcgatatc
gtcaatgtcggcgaagcctataccgatggctggctcccggaaaacgctcaggccaacatg
gaacagttcctgaccgccaataacaacgaggtcgatgcggtcgttgcctcgaacgacggt
accgctggtggcgccattgccgcccttgctgctcaggggcttgatggtgctgtgccggtc
tcgggccaggatggcgatcatgccgccctcaaccgtatcgctcttggcacccagaccgtg
tcggtctggaaagacagccgtgaacttggcgccaaggctgccgagatcgcagttgaattg
gccggcggcgctgcacttgccgatatcgaaggctcggtgacgtttgatggtggcccgaat
ggcgtcgagatgaactcgctgttcctggctcccgttgcgatcacgcaggacaatcttgat
gtggtcattgacgctggctgggtcagcaaggacgttgtctgtcagggcgttgacgccggt
tcggttgccgcttgcgactga
DBGET
integrated database retrieval system
