Pelagibacterium nitratireducens: V6617_08115
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Entry
V6617_08115 CDS
T11031
Symbol
ctaD
Name
(GenBank) cytochrome c oxidase subunit I
KO
K15408
cytochrome c oxidase subunit I+III [EC:
7.1.1.9
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00190
Oxidative phosphorylation
pnf01100
Metabolic pathways
Module
pnf_M00155
Cytochrome c oxidase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
V6617_08115 (ctaD)
Enzymes [BR:
pnf01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.9 cytochrome-c oxidase
V6617_08115 (ctaD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COX1
Motif
Other DBs
NCBI-ProteinID:
WWT34417
UniProt:
A0ABZ2IBG2
LinkDB
All DBs
Position
complement(1619174..1621708)
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AA seq
844 aa
AA seq
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MSDRLEQLPNKGPRPEGELEDLKRIWATPTGWRLPTAVNNTVIGTLYIGVAFLFFILAGI
LALVMRTQLAVGDNTLVSQDLYNQLFTVHGTTMMFLFAVPAVEALGVLLLPQMLAARDLP
FPRLSAFAIWAYVIGGLVFFSTIFYDLAPRGGWFMYPPNTLPEFSPGNSEDFWLLGIGFI
EISAIAGAIEIIVGVLRTRPPGMTLAKMPIFCWAMLIFAAMIVFAFPAVILATMLLEIER
AFGWPFFSAELGGDSLLWQHLFWFFGHPEVYIIFLPAAGLVSMMIPTMAQTPLVGYRLIV
VALIATGFFSFGLWVHHMFTTGIPGLSLAFFSAASMAVAIPSGIQVFSWIATMAAGRKRF
RLNVPSLFILGFLFIFTLGGLTGVMVAVVPFDFQAHDSYFVVAHFHYVLVGGMVFPLFAT
FYYWAPIVSRTMLSERLGTWAFWLMFIGFNVTFFPMHITGLAGMPRRVWTYPSNLGWDVL
NMISTVGAFTIAAGVLVFVIDLIRNFRIGNGGPENPWGAGTLEFLPNDVYAMRSIPHVTS
REPVWDNPNLPREVDEGLHYLPNAPTGGRETLVTSAVDAEPQYVLQMPGPGWSQLAAAAM
TAAFFLLLTIKQVEIALACGVLAIAACIFWTWQLDKPGIGKVDIGGGISVPTYVTGPLSH
SWWAMVVLMLVSASLYVSYIFSYLYLWTVSPDVWAPNGSPAPPSLLFPLGSALLFVGGAA
ILFWVGRIIPPEGRRSIAVIAAMAMAALAMAAGVGLEIWGHTLTGLGPTASSYGAMVYMA
PVLTGQAGAAAIIMCLFAAARHATSQLDNIRRVMFDNAALLYYYTVGQGLVGLLLIHGFP
RLIG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatagattagaacaattgcccaacaagggcccccgccccgaaggcgagctcgaa
gacctcaaacgtatctgggcgactcccactggctggcggctacccacggcggtcaacaac
accgtgatcggcacgctctatatcggagtagcgttcctgttcttcatactggcgggtatc
ctggcgttggtcatgcgcacgcagctggcggtcggtgacaatacgctggtcagccaggac
ctctacaatcagctctttaccgtacacggcacgacgatgatgttcctcttcgccgtgccg
gccgtggaagcgctcggcgtcctgttgttgccgcaaatgctggcagcgcgagacctgccg
ttccccaggctgtcggcctttgccatctgggcctatgtcattggcggattggtgtttttc
tcgaccatcttctacgatctcgcccccagaggcggatggttcatgtatccgccaaacacc
ctgcccgaattttcgcccggcaacagcgaggatttctggcttttgggcatcgggttcatc
gaaatttcggccatcgccggggccatcgagatcatcgtcggggtgttgcggacgcggccg
ccaggcatgacgctggccaagatgccgatcttttgctgggccatgctgatctttgcggcg
atgatcgtctttgccttcccagccgtcattctcgccaccatgctgctcgagatcgagcgc
gcctttggctggccgttcttttcggctgaactgggcggcgattccctgctttggcagcac
ctgttctggtttttcgggcaccccgaggtctatatcatcttcctgcccgctgccgggctg
gtctccatgatgattcccacgatggcccagacgccgctcgtcggttaccggctcatcgtc
gtggccctgatcgccaccggcttcttttcgttcggtctgtgggtgcaccacatgttcacg
accggaattccgggactgagccttgccttcttttcggcggccagcatggcggtcgccatt
ccgtctggcattcaggtcttttcctggatcgcgaccatggcggccggccgcaaacggttc
cggctgaacgtgccctcgttgttcatcctgggctttctattcatcttcacactgggcggc
ttaaccggggtcatggttgccgtcgtccccttcgatttccaggcccatgacagctatttc
gtggtcgcccatttccactacgtacttgtcggcggcatggtcttcccgctgtttgcgacc
ttctattactgggcaccaatcgtgagcaggaccatgctgtcggaacggctgggcacatgg
gcattctggctgatgttcatcggctttaacgtcaccttctttcccatgcacataaccggc
cttgcgggaatgccgcggcgcgtgtggacctatccttccaatctgggctgggacgtactc
aacatgatctcgacggtcggcgccttcacgatcgcggcgggcgttctggtgttcgtcatc
gacctcatacgtaatttccgtattggcaatggcgggccggaaaacccctggggcgccggg
acactcgaatttctgcccaacgatgtctatgccatgcgctcgattccccacgtcaccagc
cgcgagcccgtctgggacaatcccaacttacccagagaagtcgatgaggggctccattac
ctcccaaacgctccgaccggaggccgcgagacgcttgtcacctcggccgtcgatgccgag
ccgcaatacgttttgcagatgcccgggccgggctggtcccaactggcggcagcggcgatg
accgcagcgtttttcctcctcctgaccatcaagcaggtcgaaatcgcgctggcctgcggc
gtgcttgccattgccgcctgcattttctggacctggcaactcgacaagcccggcatcggc
aaggtcgatatcggtggcggcatcagcgtgccgacctatgtcacaggaccgctatcgcac
agttggtgggccatggtcgttctgatgctggtctccgcctcgctctatgtgtcctacatt
ttttcctacctctatctctggacggtttcacccgacgtctgggcacccaacggctctccg
gcgccgccctccctgctcttcccattgggcagcgctctgttgtttgtaggcggggcagca
attctcttttgggtcggtcggatcatccctcccgaagggcggcgcagcattgcggtcatc
gccgcaatggcaatggcagcgcttgccatggcagccggggtggggctcgagatatggggg
catacgctgacggggctgggcccgactgcatcgtcctatggagccatggtctatatggcg
cccgtcctgaccggtcaggccggagcggcggcgatcatcatgtgcctgttcgctgccgcg
cggcacgccacgagccaactcgacaacatccgacgcgtaatgttcgataacgccgcgctt
ctttactattacactgtgggccaggggctcgtggggctcttgctcatccacggcttccca
cgtctgattggatag
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