Pelagibacterium nitratireducens: V6617_08155
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Entry
V6617_08155 CDS
T11031
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
V6617_08155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnf03400
]
V6617_08155
DNA repair and recombination proteins [BR:
pnf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
V6617_08155
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WWT34424
UniProt:
A0ABZ2I4Z0
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All DBs
Position
1627030..1627887
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AA seq
285 aa
AA seq
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MPSARPIWKGQIRLSLVAIPVELYSASKSGARLSFRQIHEPSGKPVKYEKIVPGVGPIDS
DEILKGFEYEKNDFVLLEDEEIDAVKLETRKTLELVQFVGGCEIDPIYFDKSYYVVPQDE
LAEDAFRVVRDALRTTEKVGLGQIAMRGREYICALKPCGTGLLLETLHYEDEIRKSDPFF
SGISKSKAEKDLLDVATQLIERKTAPFEAGKFKDHYTQALRALVDRKLKSKGKRKVSTDT
EEPTTAESKGNVIDLMDALKSSLEGTGGRKKAASKSTKTTRKKAS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgcacgtcccatctggaaaggtcagatcaggttgtctctggtggccataccg
gtcgaactctattcggcctccaagtcaggtgcacgactttccttccgccagattcacgag
ccatcgggcaagccggtcaagtacgaaaaaatcgtgcccggagttgggccaatcgactcc
gacgagatcctcaagggattcgaatacgaaaagaatgacttcgttctgctcgaagacgag
gaaatcgatgccgtcaaactcgaaacccgcaaaacgctcgaattggttcaatttgtgggc
ggatgcgagatcgatccgatctatttcgataaatcctattatgtcgtgccacaggacgag
ttggcagaggatgccttccgggtggtccgggacgcgctgcggacgaccgaaaaggttgga
ttgggccagattgccatgcgtgggcgcgaatatatctgcgcgctaaaaccgtgcggaacc
gggcttttgctggagactcttcactatgaagatgaaatccgaaaatccgatccgttcttc
tcgggaatatcgaaatccaaggccgaaaaggaccttctcgacgtcgccacgcagctcatc
gagcgtaagacggcgccgttcgaggcgggaaagttcaaggatcattatacccaggctttg
cgcgcccttgtcgacaggaagctcaaatccaaaggcaagcgaaaagtctctaccgatacc
gaagagcccaccaccgccgaatccaagggcaacgtgatcgacctcatggatgcgctgaaa
tccagcctcgaaggcacaggaggccgcaaaaaggcagcatcgaaatccacgaaaacaacg
cgcaagaaggcaagctga
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