Pelagibacterium nitratireducens: V6617_08290
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Entry
V6617_08290 CDS
T11031
Name
(GenBank) substrate-binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02010
ABC transporters
pnf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6617_08290
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6617_08290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_08290
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
V6617_08290
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
WWT34450
UniProt:
A0ABZ2IAD8
LinkDB
All DBs
Position
1653608..1654960
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AA seq
450 aa
AA seq
DB search
MSDLKRGISRRRVVKTGMAGILATGVSPLILSKGAWAQEFCNAPTGDTVTLGFNVPQTGA
YADEGADELRAYQLAVEHLNGEGDGGLIPHFSSKTLTGSGILGKRVEYVTGDTQTQSDPA
RESARRMIERDGAVMITGGSSSGVAIAVQSLCQDMGIIFMAALTHSNDTTGKDKRKYGFR
HFFNAYQSGVGLGPQLGAAYGNDRRAYHLTADYTWGWTQEESMIAATEALGWETVETVRT
PVGAGDFSQYITPVLNSGADVLILNHYGFDGINSLTQATQFGLRDRQANGKDFQLVLPLV
SDLMAAGAGSAMQGVYGTSNWYWSMQDEGSKAFTASFGAKFGSPPSQAAHTAYVQTLLYA
DAVERAGTFYPPEVIAALEDFEFDGMGNGPTLYRGSDHQCFKDVLVVQGKEQPSNEFDLL
EVVNTASRDSVTYDPSIFGGELGSADPQMC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttgaaacgcggaatcagccgtcgtcgcgtcgtcaagacgggcatggctggc
atcctggcgacgggggtttcccccctcattttgtccaagggggcttgggcgcaggaattt
tgcaacgcgccgaccggtgataccgttaccttgggtttcaacgtaccccagaccggcgct
tatgccgacgaaggcgccgatgaactcagggcctatcagctggcggtcgaacatctaaac
ggcgagggcgatggcggtctgatcccgcatttttcatccaagacccttaccggaagcgga
attttgggcaagcgcgtcgagtacgtgaccggcgacacccagacccagtccgatcccgcc
cgtgaatcggcccgccgcatgatcgagcgcgatggtgctgttatgattaccggcggttcg
tcgtccggcgttgccatcgctgtgcaaagtctttgccaggacatgggcatcatcttcatg
gcggccttgacccattccaacgacacgacgggcaaagacaagcgcaaatacggcttccgc
catttcttcaatgcctatcaatcgggtgttggtctggggccgcaactgggtgctgcctat
ggcaatgatcgccgcgcctatcatctgaccgccgactacacctggggctggacgcaagaa
gaatcgatgatcgccgcgaccgaagcgcttggttgggagaccgtcgaaacggtccggacg
ccggtgggcgctggtgacttcagccagtatatcacgccagtcctcaactctggcgccgac
gttctgattctcaatcactacgggtttgacggcatcaactcgttgacccaggcgacccag
ttcggtcttcgcgaccgtcaggccaacggcaaggatttccagttggtccttccgctggtt
tccgatctcatggcggctggtgccggctcggcgatgcagggcgtttacggcacgtcgaac
tggtactggagcatgcaggatgaaggctcgaaagcctttaccgcttcattcggcgccaaa
ttcgggtcgccccccagtcaggcggcgcataccgcatatgtccagacgctgctttatgcg
gatgccgtggaacgggccggtacattctatccgcccgaggtcattgccgcgcttgaagat
ttcgagttcgacggcatgggcaatggtccgaccctttatcgtgggtccgatcaccagtgc
ttcaaggacgttctggtcgttcagggcaaggagcagccatccaacgagttcgaccttctc
gaagtggtgaataccgcctcgcgtgacagtgtcacctacgatccgtcgatcttcggcggg
gagttgggctcggccgacccgcaaatgtgctga
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