Pelagibacterium nitratireducens: V6617_08570
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Entry
V6617_08570 CDS
T11031
Name
(GenBank) hypothetical protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00330
Arginine and proline metabolism
pnf00480
Glutathione metabolism
pnf01100
Metabolic pathways
pnf01110
Biosynthesis of secondary metabolites
pnf04148
Efferocytosis
Module
pnf_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
V6617_08570
09106 Metabolism of other amino acids
00480 Glutathione metabolism
V6617_08570
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
V6617_08570
Enzymes [BR:
pnf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
V6617_08570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WWT34502
UniProt:
A0ABZ2I3X2
LinkDB
All DBs
Position
complement(1704726..1705877)
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AA seq
383 aa
AA seq
DB search
MDHAPSRTYANTAELIATEEPDYPSFLFSERLLVDAINTFKAGFDGLLTYAVKSNPSPHI
LEIMNREGLKAYDVASNTEMALIRKYAPQAGMHYNNPIKSRREIERAYSEFGVRSFTIDH
VAQLDQLAAVIPPSEDVEVTVRFKAGKALKSYDFGTKFGVMEEGAIAICTLAKAMGYSTS
LCFHVGSQCEEAYAYERHIAAAGRIAQASGIELKRLNIGGGFPAPYITNSAPPLDVYFET
IRNAVADTFGSNKPELIAEPGRGLSTGCTSLLLRVKHVRGEQSVYLNDGVYGSLMEAMIL
EFMPPIRVWRGDKVLTGESWDFKIFGPTCDSYDVMPQTFILPAAIAEDDYIEFGLMGAYT
QASLTPFNGFDRRDLYWVDDILV
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgcgccgtctcgcacatacgcgaacaccgcagaactgatcgccaccgaggaa
cccgactatccgagtttcctgttttccgaacggcttctggtcgatgcaataaataccttc
aaggcgggctttgatggcctgttgacctatgcagtcaaatccaatccttcgccccatatc
ctcgagatcatgaatcgcgaggggctcaaggcctacgatgttgcctccaacaccgagatg
gccctgatccgcaaatacgcgcctcaagccgggatgcactacaacaatcccatcaagtcg
cgtcgagagatcgagcgcgcctattccgaattcggcgttcgctcctttaccatcgaccat
gtggcccagctcgaccagctcgccgccgtcatcccgcccagcgaggatgtcgaggtgact
gtgcgcttcaaggccggcaaggcgctcaaatcctatgatttcggcaccaagttcggcgtt
atggaggaaggcgccatcgcgatctgcacattggccaaggccatgggatattcgacctcg
ctgtgcttccacgtcggcagccagtgcgaggaagcctatgcctatgagcgccacatcgcc
gctgcagggcgcatcgcccaggcctcgggcatcgagctcaagcgcctcaatatcggcggc
ggctttcccgccccatacatcaccaattcggcgccacccctcgacgtctatttcgagacc
atccgcaacgctgtcgccgatacgttcggctcgaacaagcccgaactgattgccgagccc
ggacgcggcctgtccacgggctgcacatcgctcctgctgcgcgtcaaacacgtgcgcggc
gaacagtcggtctatctcaacgacggcgtctatggctcgctgatggaagcgatgatcctt
gaattcatgccaccgatccgcgtgtggcgcggcgacaaggtgctgaccggcgagagctgg
gacttcaagatcttcgggccaacctgcgacagctacgacgtcatgccccagaccttcatc
ctgccggccgccatcgccgaggacgattatatcgagttcggcctgatgggcgcctacacg
caggcctccctcaccccgttcaacggctttgaccgtcgcgacctctattgggtcgacgac
attctcgtgtga
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