Pelagibacterium nitratireducens: V6617_08725
Help
Entry
V6617_08725 CDS
T11031
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00550
Peptidoglycan biosynthesis
pnf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6617_08725
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pnf01002
]
V6617_08725
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnf01011
]
V6617_08725
Enzymes [BR:
pnf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6617_08725
Peptidases and inhibitors [BR:
pnf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
V6617_08725
Peptidoglycan biosynthesis and degradation proteins [BR:
pnf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
V6617_08725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
Beta-lactamase2
SPOR
Peptidase_S13
Beta-lactamase
HTH_8
Motif
Other DBs
NCBI-ProteinID:
WWT34532
UniProt:
A0ABZ2I403
LinkDB
All DBs
Position
complement(1733507..1735081)
Genome browser
AA seq
524 aa
AA seq
DB search
MPTLLRIDSARVPFVRFFLTLVIAAMTLAAVSAPAAAQNVPRAYAGIAVDAKTGQVLYQD
NANELRYPASLTKVMTLYIIFQELEAGRLKLDSKLRVSQYASQAVPTKLWVQPGSTITVE
DAINALVIISANDVARVVAENISGTESQFAERMTQTARALGMSRTTYKNANGLPNSGQVT
TAADQAILGRAVYLHFPHYYDYFQARSFKYNGRTYNGHNALLGQNGVDGIKTGYINASGY
NLMTAARSSNRHIVVIGLGFNTGASRNARVAELVRTYLPKARQGDYWREAMIPRPTLLGN
GVAVASAGAAVPLNRLPPGRPVNLLPVITAEQAMQVASLSQSASGSAPDSNEPETIPFQI
VSAEDIPSRPGDNALDQATYVATGVMPSEAPVYPADDPIGAWIAESLQLGPQSGQVLVPP
APIARPDGLALDTMSTNSAETVPAGGWVVQVGAADSEDNAEQLLSEATRTYDQLANLRSY
VETFERNGVTYYRARFAGFADRTQARTTCDALSQAAINCLTVQG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacccttctgcgtatcgattccgcgcgcgtcccttttgtacgcttttttctcaca
cttgtgatcgcggcgatgacccttgccgccgtttccgctcctgcggcggcgcaaaatgtg
ccgcgtgcctatgccggcatcgccgtggatgccaagaccggccaggtcctctatcaggac
aacgccaacgagttgcgctaccccgcttcgctcaccaaggtgatgacgctctatatcatc
tttcaggagctcgaggctggccggctcaagctcgactcgaaactgagggtttcccaatac
gcctctcaggcagtcccgacaaagctctgggtgcagcccggcagcacgatcaccgttgaa
gacgcgatcaacgccctcgttataatatcggccaatgacgtcgcccgcgtcgttgccgaa
aatatttcgggtacggagtcccagttcgccgagcggatgacgcaaaccgcaagggcgctg
gggatgtcgcgcaccacatacaagaacgcaaatggcctgcccaactccggacaggtcacg
acggccgccgaccaagcgatcctgggccgggccgtctatctccatttcccccactactac
gactatttccaggcccgcagcttcaagtacaacggcagaacctacaacgggcacaacgcc
cttctgggccagaacggcgtcgatggtatcaagaccggctatatcaatgcgtcgggctac
aacctgatgaccgccgcccgctccagcaaccgccatatcgtggtgatcggcctggggttc
aacaccggcgcttcgcgcaacgcgcgcgtcgcagagctggtgcgcacctatctccccaag
gcgcgccagggcgactactggcgcgaagcgatgatcccgcgccccaccctgctcggcaat
ggcgttgccgtggcatcggcgggtgctgccgttccgctcaatcgcctgccccccggccgt
cccgtcaaccttctgccggttatcacggcggagcaggccatgcaggtggcgtcgctcagc
cagtccgcttccggatcagcgccggactcgaacgaacccgagaccatcccgttccagatc
gtttcggccgaggacattccctcgcgtccgggcgataacgccctcgaccaggcgacctat
gtcgcaaccggcgtcatgccgtccgaagccccggtctatcccgccgacgatccgattggc
gcatggattgcagaatccctgcagctcggcccgcaatcgggacaggttctcgtgccgccc
gcgccaattgcacggcccgacggcctggcgctcgacacaatgagcacaaacagcgccgag
accgttccggccggtggctgggtggtccaggtcggcgccgccgacagcgaagacaacgcc
gagcagttgctgagcgaagcgacccgcacatacgatcagcttgccaaccttcgcagctat
gtggagaccttcgagcgcaacggcgtgacctattaccgcgcccgtttcgccggctttgcc
gatcgcacgcaggccagaaccacttgcgatgcgctctcacaagccgcgatcaactgcctc
acggttcaggggtaa
DBGET
integrated database retrieval system
