Pelagibacterium nitratireducens: V6617_09155
Help
Entry
V6617_09155 CDS
T11031
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00270
Cysteine and methionine metabolism
pnf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
V6617_09155 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnf03000
]
V6617_09155 (dcm)
03032 DNA replication proteins [BR:
pnf03032
]
V6617_09155 (dcm)
03036 Chromosome and associated proteins [BR:
pnf03036
]
V6617_09155 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
pnf02048
]
V6617_09155 (dcm)
Enzymes [BR:
pnf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
V6617_09155 (dcm)
Transcription factors [BR:
pnf03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
V6617_09155 (dcm)
DNA replication proteins [BR:
pnf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
V6617_09155 (dcm)
Chromosome and associated proteins [BR:
pnf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
V6617_09155 (dcm)
Prokaryotic defense system [BR:
pnf02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
V6617_09155 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
FtsJ
Motif
Other DBs
NCBI-ProteinID:
WWT34615
UniProt:
A0ABZ2IAY4
LinkDB
All DBs
Position
1842406..1843701
Genome browser
AA seq
431 aa
AA seq
DB search
MKFIDLFAGLGGFHQALSQRGAECVFASELDEALADLYEKNFGIRPAGDIRKVDLKTIPE
HDLLCAGFPCQPFSKAGDQLGLECPQWGDLFDYVVAILRLKKPRHFIIENVPNLVRHNGG
ATWKTICSRLTKLGYDISYAKLSPHMFGVPQKRERAFIVGDRQGLQGFDWPIPDLLPEVS
ISDVLDTEPAEALNISANHVRYLNTWQRFLKDFPEDEDLPSFPIWGMEFGADYPLEGKTP
HERGYKLLGQYRGAFGVPLDGMSPEEVQASLPGYAQTKLAEFPDWKIDFIEKNRALYKRH
KKIIDPLLTELKTFPPSFQKLEWNCKGSERDIWKHVIQFRASGIRVKKSTTAPSLIAMTT
SQVPIIAWERRFMTPRECSRLQSMGGLKYLPETKDGAYKAFGNAVNVDVVRHIFDALTNR
RFGEAALMAAE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttatcgatctatttgccggacttggtggctttcatcaagcattgtcgcagcgc
ggagcagagtgtgtattcgcctcggagttggatgaagctcttgctgacctttacgagaaa
aattttggtatccgccccgcaggggatatccgcaaggtcgacctcaaaaccattcctgaa
catgacctcctgtgtgcaggctttccgtgccagcccttttccaaggcgggggatcagttg
gggcttgaatgtcctcagtggggcgacctgttcgactatgtcgtcgcgatacttcgcctg
aaaaagccgcggcatttcatcattgaaaatgttcccaatctcgttcggcacaatggcggc
gccacctggaagaccatttgttcgcgactgacgaagctcggctacgatatctcttacgcc
aagctatctccgcatatgtttggcgttccccagaagcgagagcgcgcattcattgtcggc
gatcgccaagggctgcagggtttcgattggccaatcccagatctgctgccggaagtgtcc
atcagcgatgtgctggatacagagccggcagaggccctcaatatcagtgctaatcacgtt
cgctacctgaatacatggcagcggtttttgaaggactttcccgaggacgaagatctgcca
agttttccgatatggggaatggagttcggcgccgattatccgcttgagggaaagacgccg
cacgagcgcggctacaagcttctcggccaatatcgtggcgccttcggggtgccgctggac
ggcatgagcccagaggaggtgcaagcaagcttgcccggttacgcgcagaccaaactggca
gagttccccgactggaaaatagacttcatcgagaagaaccgcgccctctacaagcgacac
aagaagatcatcgatcctttgcttactgagctcaaaacctttccgccgagcttccagaag
cttgaatggaactgcaagggcagcgagcgggacatctggaaacacgtcattcagtttcgg
gcgagcggcatcagggtgaagaaatcgactaccgcgccgtcgctgattgcgatgacgaca
agccaggtcccaatcattgcgtgggaacggcggttcatgacgccgcgcgagtgcagcaga
cttcaaagcatgggtggcctcaagtatttaccagaaaccaaagatggagcctacaaagcg
ttcggaaatgctgtgaacgtcgacgtggttcgccacatatttgatgcgctaaccaatcgt
cgttttggcgaagcggcgctcatggcggccgagtga
DBGET
integrated database retrieval system
