Pelagibacterium nitratireducens: V6617_09460
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Entry
V6617_09460 CDS
T11031
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pnf Pelagibacterium nitratireducens
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnf03032
]
V6617_09460
03036 Chromosome and associated proteins [BR:
pnf03036
]
V6617_09460
03400 DNA repair and recombination proteins [BR:
pnf03400
]
V6617_09460
DNA replication proteins [BR:
pnf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
V6617_09460
Chromosome and associated proteins [BR:
pnf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
V6617_09460
DNA repair and recombination proteins [BR:
pnf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
V6617_09460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Urease_beta
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
WWT31270
LinkDB
All DBs
Position
1921363..1921635
Genome browser
AA seq
90 aa
AA seq
DB search
MNKNDLSAAVAEKADLTKAQAAAAVDAVFEAITAALKGGDEVRLVGFGTFAATQRKATKG
RNPATGAEIDIPASTQPKFKAGKGLKDALN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgatctgagcgcggctgtcgccgaaaaggctgatctcaccaaggcccag
gcggcagcagcggttgatgctgttttcgaagccatcaccgccgctctgaagggtggagac
gaagttcgcctcgtcggtttcggcactttcgctgcaacccagcgcaaggccaccaaaggc
cgcaacccggccaccggcgcggaaatcgacattccggcttcgacccagcccaagttcaag
gccggcaagggcctcaaggacgcgctgaactaa
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