Pelagibacterium nitratireducens: V6617_09830
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Entry
V6617_09830 CDS
T11031
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6617_09830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_09830
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
V6617_09830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
HEAT_2
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WWT31338
LinkDB
All DBs
Position
complement(1994483..1996054)
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AA seq
523 aa
AA seq
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MTRLGLIAGVLLATSAMAGIANAETFRWSATTDPSTMDPHAANLAPVTSFLNNIYEGLVR
RGKDMALEPSLATSWEPLEDEDGWRFHLREGVTFHDGSTFNADDVLFSYERGISEQSDVR
SWFAPVSEVRVVDDLTVEIVLNAPNPIFPDSIANWMIMDRDWAQANGSIAPARDQQTAAT
LETNGTGPFMLVDREPGVQTTLVPNPDWWDTPEHNITQAVFNPITTAATAIAALVSNEVD
MLASVPVQDVERLRASEGITIFEGIEARVIMLGFGHDKDMLYGGDGSVQGNPFQDVLVRR
AVAHAVNVEAIDQILMNGLAKPASQLQPAGLSGYSQEHSDRPEYDLERAAQLLDEAGHPD
GFSFNFKCTNDRYLNDSEVCQAIVAMLAQIGLEAQLEAIPVANYWTELREGNYDMYLLGW
SPGTFDAEHPIRFLAHTPTDTLGTWNYGGYSNARIDELLPMVQSELDPQLRQSMLDEIAG
ILQEEVAYVPLYEEPLVWAARDGISVVQRPDNFFMLRWVTVDR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaccagattagggcttatagcgggtgtgctgttagcgacatctgcgatggctggcatt
gccaacgccgagacctttcgctggtcagccacgaccgatccatcgaccatggatcctcat
gcggccaatctggcaccggtcacctcgtttctcaacaacatatacgaagggctcgtccgc
cgcggcaaggacatggcgctcgaaccctctctggccaccagttgggagccgctcgaggat
gaagatggctggcgcttccatttgcgcgaaggggtcacgtttcatgacggttcgaccttc
aacgccgacgatgtgctgttttcctacgagcgtgggatctccgaacagtcggacgttcgc
tcatggttcgcgccggtatctgaagttcgcgtagtggacgatctcaccgttgagatcgtg
ctcaatgcgcccaacccgattttccccgattccatcgccaactggatgatcatggatcgc
gactgggcccaggccaatggctcgattgccccggcccgcgatcagcagaccgcggctaca
ttggagaccaacggcacagggccatttatgctggtcgatcgggaaccaggggtccaaaca
acgctcgtgcccaatcctgactggtgggatacccccgaacacaacatcacccaagccgtc
ttcaatccaattaccacagccgcgaccgcaatcgccgcccttgtctccaacgaggtggac
atgctggcttcggtgccggtccaggacgtcgagcgcttgcgggccagtgagggcatcacg
atctttgaagggatcgaggcacgcgttatcatgctcggcttcggccacgacaaggacatg
ctttatggcggcgatggctcggtgcaaggcaatccctttcaggacgtgttggttcgccgg
gccgtagcgcatgcggtcaacgtcgaggccatcgatcaaatcctgatgaacggcctcgcc
aagcccgcaagccagcttcaacccgccggattgtcaggctattcacaagaacattccgac
cgcccggaatatgacctcgaacgggcagcccaacttttggacgaggccggccatcccgac
gggttcagcttcaatttcaagtgtaccaacgatcgctatctcaacgattcagaggtctgc
caggccatcgttgccatgctcgctcagatcggcctggaagcgcagctcgaggcaattccg
gttgccaattactggaccgagctgcgtgaaggcaattacgatatgtatctgctcggctgg
tcaccgggcaccttcgacgctgagcacccgatccgctttcttgcacacacgccgaccgac
actctgggcacatggaactacggtggctactcgaacgcccgcatcgatgaattgcttccc
atggtccaatcagaactcgatccccaattgcgtcagtccatgctcgacgaaatcgccggc
attctgcaagaggaggtcgcatacgttccgctctatgaagaaccgctcgtctgggcggca
cgcgacgggatatcagtcgtgcagcgtcccgacaatttcttcatgctgcgctgggtcact
gtcgatcgctag
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