Pelagibacterium nitratireducens: V6617_11850
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Entry
V6617_11850 CDS
T11031
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
pnf Pelagibacterium nitratireducens
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pnf03009
]
V6617_11850 (der)
Ribosome biogenesis [BR:
pnf03009
]
Prokaryotic type
GTPases
V6617_11850 (der)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
Ras
RsgA_GTPase
Roc
Arf
ABC_tran
SRPRB
AAA_24
Septin
DUF5906
AAA_29
TniB
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
WWT31706
UniProt:
A0ABZ2HZF6
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All DBs
Position
complement(2381989..2383449)
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AA seq
486 aa
AA seq
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MSASVTVAIVGRPNVGKSTLFNRLVGRKIAIVDDTPGVTRDRREGLGRIGDLTFTLVDTA
GYEDANDDSLEARMRRQTEMAIAEADVILFMIDARAGLTPTDEHFARLLRKADKEIHVIG
NKAEGRAAEAGLVEAYALGFDEAIPLSAEHGLGLADLYSIISQAVDRADEAKAAAAEAEF
DYDMVQKPAVDVDVNEDEGEDQAGDTAPLRWNPNRYLNVAIVGRPNAGKSTLINRMVGEE
RLLTGPEAGITRDSIMVPWEWEGRVINLVDTAGIRRKSRVQQKLEKLSVSDSLRSIQYAE
IVVLLLDATIPFEKQDLALADLVEREGRAMVIAVNKWDLIEDKNAKILELRAECERLLPQ
LRGIPLVTMSGLQGRNIDKLMKAIFEIERTWNVKIRTAKLNRWLASMTEHHPPPAVSGRR
LKLRYMTQAKTRPPSFIIFASRPDALPKAYQRYIVNGLREDFNLPGTPIRLWVRGGKNPY
VDDDGK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaagcgtaaccgtcgccatcgtcggccgccccaacgtcggcaaatcgaccctg
ttcaatcggctggtgggccgcaagatcgccatcgtcgacgatacgcccggtgtcacccgc
gaccgtcgcgaagggctgggccggatcggcgatctgaccttcacgctggtcgataccgcc
ggctatgaagacgccaacgacgacagtctcgaagcgcgcatgcgccgccagaccgaaatg
gccatcgccgaagccgacgtcatcttgttcatgatcgacgcccgcgccgggctgacgcca
acagacgagcatttcgcccgtctgctgcgcaaggccgacaaggaaatccacgtcatcggc
aacaaggccgagggcagggccgccgaggccgggctggtcgaggcctatgccctgggcttt
gatgaagccattcctctctccgccgagcacggattggggctggccgatctctattccatc
atttcccaggccgtcgacagggccgatgaagccaaggctgctgccgcagaagccgaattc
gactacgacatggtgcaaaagcccgctgtcgatgtggacgtcaacgaagacgagggcgag
gatcaggccggcgacacggctcccctgcgctggaaccccaaccgttatctcaacgtcgcc
atcgtcgggcgccccaacgcgggcaaatcgacgctgatcaaccgcatggtgggcgaggaa
cgtcttctcaccggccccgaagcgggcatcacccgcgattcgatcatggtcccgtgggag
tgggaaggccgggtcatcaacctggtcgataccgcaggcatccgccgcaaatcccgcgtg
cagcaaaagctcgaaaagctctcggtctccgacagcctgcgctccatccagtacgccgaa
atcgtcgtcctgctgctcgatgccaccatcccattcgaaaaacaggacctggcgctggcc
gatctggtcgagcgcgaaggccgcgccatggtcatcgccgtcaacaaatgggacctgatc
gaagacaagaacgccaagatcctcgaactgcgcgccgaatgtgaacgcttgttgcctcag
ttgcgcggcatcccgctggtcaccatgtcgggcctgcagggccgcaacatcgacaagctc
atgaaggcgattttcgagatcgagcggacctggaacgtcaagatccgcactgccaagctc
aaccgctggctcgcatccatgaccgagcaccatccgcccccggcggtgtccggccggcgc
ctgaaactgcgctacatgacccaggccaagacgcgcccgcccagctttatcatcttcgcc
tcacgtcccgatgcgctgcccaaggcctatcaacgctacatcgtcaacggcctgcgcgaa
gacttcaatctccccggcacccccatccgcctctgggttcgcggcggcaagaacccctat
gtcgatgacgacgggaagtag
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