Pelagibacterium nitratireducens: V6617_12305
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Entry
V6617_12305 CDS
T11031
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
pnf Pelagibacterium nitratireducens
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Gene cluster
GFIT
Motif
Pfam:
LysM
Motif
Other DBs
NCBI-ProteinID:
WWT31791
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Position
complement(2488722..2490767)
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AA seq
681 aa
AA seq
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MNETFFGGSAATTGDGETAQELASGPVEEQASSDAETSEAADAAGSQETATSVSEAVMPA
FGLVRVEPDGSAVIAGSATPSGEVRIFANEDQIGAETAQTSGDFAFVTDAPLPTGGVELR
ILDVETDRFADTSVIVVVQDDRTSEPLVIASAPGEASEILQGLDNPTVAAAEQQAVPESP
EPETSPETLAVAEADMESPQADPPAPNAAEPDVEMTADQDADGQTAADEALEVPVEAGNE
QEESPASDIEANEAEPSQETAIAAPMTAPLQQAESVDEQSAPAPQEQPAPVPATTPMQDE
ETTSPDETAPQDEGDVVEDAPAPVAVAAADEPAPPAQEPVPSTEGQEPVPAARPANVTPP
LAESDDAEVAVAAEEDAAVPAVELDSAPSGEEPSDGAAAAVSEPAEDLESPAPAQPAVAA
PPQQTFAAPTIDAVEIDGDRNFFAGAGEDGLTVRLYVDNAIVGSTEVSDGRWLIEAIDVL
DQENQRIRIDMLAEDGSVVGRAEVDFILELPEAVDEDIVVAEQRETETVGASPAQSQEAD
LSASGDVETPDAPEPVTSDAAEPPAPTAEPAQSAEPAETVEPTGSVEPAEPAETVEPAIP
TLVGVSDGNRTATGLAIIRQGDNLWTIARRVYGEGIRYTQIFEANTDQIRNPDLIYPGQV
FDLPGTDEVIGEADDAASSRQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagacgttctttggcggatcggccgcgacaactggtgacggcgagacagcacag
gaacttgccagcggccccgtggaagagcaggcatcatctgatgctgagaccagtgaagcg
gcggatgcggcggggagccaggagacagcgaccagcgtttcagaggctgtaatgcccgcc
ttcggcctcgttcgtgttgaacccgacggttccgcagtgattgccggcagcgcgacgcca
tccggcgaagtccgtatttttgccaatgaggaccagatcggggccgagacggcgcagacc
tcaggcgactttgccttcgtgaccgacgctccgctgccgacgggcggtgtcgaactgcgc
attctcgatgttgaaacggaccggtttgccgacacgtcggttatcgttgtcgttcaggac
gaccgaaccagcgaacctctggtcatcgcatcggcgccgggcgaggcgagcgaaatattg
caggggctcgataacccgacggttgcagcggccgaacaacaagctgtgccggagtcgcca
gagcccgaaacaagcccggagaccctagcggttgccgaagccgatatggaaagcccgcaa
gccgatccgcccgccccgaatgcagcggagccggacgtcgaaatgactgccgatcaggac
gcggatggccaaacggcagcggatgaagcgcttgaggttcctgttgaggcgggaaatgag
caagaggagagccccgcttccgatatcgaagcgaatgaggcggaacccagccaggaaacc
gcaattgctgcgcctatgactgcccccctacagcaggctgaatcggttgatgagcagtcc
gcccctgcgcctcaggagcagcctgctcctgtgcccgccaccacaccgatgcaagacgaa
gagacgacctcgcccgacgaaacagcgcctcaggacgaaggtgatgttgtcgaggatgcg
ccggcgcctgtggctgtcgccgcggcggatgagcctgctccaccggctcaagagccggta
ccctcgaccgaaggtcaagagccagtgccagccgcccggcctgccaatgtcacgccgccg
ctggctgaatccgatgatgccgaggtggcggttgcagccgaagaagacgctgctgtaccg
gctgtcgagctcgattcagcgccatctggcgaagagccatccgacggagcggcagcggct
gtttcagaacctgctgaagacctcgaaagtcctgcccctgcgcagccagccgtcgctgcg
cctcctcagcagacatttgccgcaccgaccatcgacgcggtggaaatagatggggatcgc
aatttctttgccggtgcgggtgaggatggactgactgttcgactctatgtcgataacgcc
atcgtgggttcgaccgaagtcagcgatggccggtggctcattgaagcgatcgatgtactc
gatcaggaaaaccagcgcattcgaatcgatatgcttgccgaggatggttcggtggttggg
cgtgccgaggtcgatttcatcctcgaacttcctgaggctgttgacgaagacattgtcgtg
gctgaacagcgcgaaaccgagaccgttggcgccagccccgcgcagagccaggaagcagac
ctgtcggccagtggggatgtcgagacgccagatgctccagaacccgtcacctccgacgca
gcagaacctcccgcgccaacggccgaaccggcccagagcgcggaaccggctgagacagtc
gagccgacgggatcagtcgagcccgccgaacctgctgaaacggttgaacctgccattccg
acattggttggcgtgagcgacggaaatcgaacggcaacgggattggcaatcatccggcag
ggcgacaatctgtggaccatcgcgcgtcgggtctatggcgaaggcattcgatacacgcag
atattcgaggccaacaccgaccagatccgcaatcctgaccttatctatccgggtcaggtc
tttgacctcccgggcaccgatgaagtcatcggagaggcggacgacgccgcctcctcccgg
caatga
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