Pelagibacterium nitratireducens: V6617_12620
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Entry
V6617_12620 CDS
T11031
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
pnf Pelagibacterium nitratireducens
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
PAS_8
AAA_5
AAA
HTH_8
AAA_16
PAS_7
AAA_2
PAS_3
bpMoxR
Diguanyl_cycl_sensor
AAA_22
IstB_IS21
AAA_7
DUF815
Motif
Other DBs
NCBI-ProteinID:
WWT34689
UniProt:
A0ABZ2I942
LinkDB
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Position
complement(2555720..2557573)
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AA seq
617 aa
AA seq
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MLEALISGKPDPILVVDPMRDRLLFANPAARALFGARLDRPGEGAMRSLYGACIPQLHVA
TEAALEHGCHYASDLLPDGSETAEAIEHQLVAIETADGPLVMITIASLEQRRRRTIHQEA
NDYHRQGLEEWRRAERFFREIERENQLILAAAGEGIFGVNADGVTTFVNPAAQKMLGWAA
EDLVGMNMHDMVHYKHPDGSHYHASDCPIYGAFRNGTVNTVEDECFWRKDGTSLRVEYTS
TPIEDNGALVGAVIVFRDISQRKENEAKLREAMAENARLRERLEMENAYLQEEILSQANH
YDIIGSTAPIRRILKQIDLVAPTEANVLITGESGTGKELVARAIHQASRRSDRPLIRVNC
AAIPRELFESEFFGHARGAFTGALRDRIGRFELADGGTIFLDEVGEIPLDLQSKLLRVLQ
DRRFERLGEEATREVDVRVIAATNRDLEREVSKGEFREDLYFRLNVFPIECVPLRERKDD
IPVLADHFLKIACARLNISLPMLTRANIADLMAYSWPGNARELQNLIERAAILARNGRLQ
FALSDRPPLPERNMPTLQPDAGHTGILTRDQFMVLERDNIRRALKAAQGRVAGKSGAAEL
LGVKPTTLYSRIKALGL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggctcttatttcgggcaagcccgatcccattctggtcgtggacccgatgcgc
gacaggctgctctttgccaatccggcggcacgcgccttgttcggtgcccggctcgatcgg
ccgggtgagggggcgatgcgatcactttacggcgcctgtatccctcaattgcatgtcgcc
accgaggctgcgctcgagcatggctgccactatgccagcgacctgctgcctgacggcagc
gaaacagcagaggccatcgagcatcagctggtggccatcgagactgccgatggtccgttg
gtgatgatcaccatcgcctctcttgaacagcgccgtcgccgtaccatccatcaggaagca
aacgattatcatcgccaggggctggaggaatggcgccgggccgagcggttcttccgtgag
atcgaacgggaaaaccagctcatccttgcggcggccggcgagggcattttcggggtcaat
gccgatggggtcaccaccttcgtcaatccggcggcccagaagatgctgggctgggcggcg
gaggatcttgtcggcatgaacatgcacgacatggttcactacaaacacccggacggctcg
cactatcacgcgtccgactgtcccatctacggcgccttccgaaacggcactgtcaacacg
gtcgaagacgagtgcttctggcgcaaggacggcacgtcgctgcgcgtcgaatacacctcc
acgccgatagaggacaatggggccctggtcggggcggtgatcgtctttcgcgatatctcc
cagcgcaaggaaaacgaagcaaaactgcgcgaggccatggccgagaatgcacgcctgcgc
gaacgtctggagatggagaatgcctatctgcaggaagaaatcctgtctcaggcaaatcac
tacgacatcatcggctcgactgcgccgatccgcaggattttaaagcagatcgacctcgtc
gccccgaccgaggccaatgtgctcatcaccggcgaaagcgggaccggcaaggaactggtg
gcgcgcgcaatccatcaggcgtcgcggcgctcggacagaccgctgatccgcgtcaactgc
gcggccattccgcgcgagctgttcgaaagcgagtttttcggccatgccaggggcgccttt
acgggcgcgcttcgcgaccggatcgggcgcttcgaactggctgacgggggcacgatattt
ctcgacgaggttggagaaattccgctcgatctgcaatcgaaactgttgcgcgtcttgcag
gaccgccgcttcgagaggctgggcgaggaggcaacccgcgaagtcgatgtccgcgtcatc
gcagccaccaaccgggatctggagcgcgaggtttcaaagggcgaatttcgcgaggacctt
tatttccggctcaacgtctttcccatcgaatgcgtgccattgcgtgagcgcaaggacgac
attcccgtgctcgccgaccatttcctcaaaatcgcctgcgcccggctcaatatctccttg
cccatgctcacccgcgccaatatcgccgatctcatggcctatagctggcccggcaatgcc
cgtgagctgcaaaacctcatcgagcgcgccgcgatccttgcgcggaacggacgcctgcaa
tttgccttgagtgacaggccgcccttgcccgagagaaacatgccaaccctgcagcccgat
gccggtcatacgggtatcctcacccgggatcagttcatggtgctcgaacgcgacaacatc
cgccgggcactcaaagcggcccagggacgtgtcgcaggtaagagcggcgccgccgaactg
ctcggcgtgaagccaacaacgctctattccagaatcaaggcgctcggcctgtag
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