Pelagibacterium nitratireducens: V6617_13300
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Entry
V6617_13300 CDS
T11031
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00550
Peptidoglycan biosynthesis
pnf01100
Metabolic pathways
pnf01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6617_13300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V6617_13300
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pnf01003
]
V6617_13300
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnf01011
]
V6617_13300
Enzymes [BR:
pnf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
V6617_13300
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6617_13300
Glycosyltransferases [BR:
pnf01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
V6617_13300
Peptidoglycan biosynthesis and degradation proteins [BR:
pnf01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
V6617_13300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
WWT31980
LinkDB
All DBs
Position
2697241..2699430
Genome browser
AA seq
729 aa
AA seq
DB search
MKPSSKRPKVQDPFYTKQKRAKGKNRLLEADAWLDSFLYDGMRSTGRVYTRIQDFFSLFS
VRGLRRIFVELASDALSFGAMGSVLMVALALSAMDATASGEFNRAEDYSVIFLDRYGNEI
GRRGIRSDDSVALTEIPDFLIKATLATEDRRFYEHFGIDVWGTTRALLSNAGGDSGLQGG
SSITQQLAKLLFLTNERTYERKIKELFLAFWLEANFTKDEILKLYLDRAYMGGGNVGVTA
AAEFYFGKPIQDIDLAEAAMLAGLYKAPTRWAPHVDIAAARGRANVVLTNMVNGGYLTEG
QVTAARRRPAEPVDRSAEANSPNYFLDWAFLETKRLVGDSPEVGFVVRTTIDPDLQVHAE
DAIISVLREQGTAYNVSQGAMVVMEHNGAVRAMVGGTDYGQSQFNRAVAPNRQPGSAFKP
FVYATAFEMLGLTPRSPITDAPICIGNWCPQNYGRSFRGGTTIRAAMAASINSVPVRLST
QTGREPIAEMAHRLGIRNAFPVTRSLALGVASVSALDMASAYAVFANGGYRATGFGVTRI
TTLRGEVIYEANPDENRVRLLDEQIVLSMNDILNAVNYGGTGGRAVVEGVPSAGKTGTTS
SYRDAWYVGYTGNYVASVWYGNDNYTAMNNLTGGSLPAMSWQKFMAYAHTNIEVKPVFGV
DMEPRPFIIADSANGEDGEQAPERAPTLAPAAAIKLLDLSEKMRQSLAVGGSGAIDQATA
PVAGANESL
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
ttgaagccgagcagcaaaaggcccaaggtgcaggacccgttttacacaaagcagaagcgt
gccaaaggcaagaaccggctgctcgaggccgacgcatggctggattcgtttctctatgac
ggcatgcgctcgacgggacgagtctataccaggattcaggattttttctcgcttttttcg
gtgcgtgggctgcggcggattttcgtcgaactggcatcggacgccttgagctttggcgcc
atgggctctgtgctgatggtggcgctggcgctttcggcgatggatgcaaccgcctcgggc
gagttcaaccgggccgaggactattcggtgatctttctggaccgctacggcaacgaaatc
gggcggcgcggcatccggtccgacgattcggtggcgctgacggaaatccccgactttttg
atcaaggcgacgctggcgaccgaggacaggcggttttacgagcatttcggcatcgacgta
tggggtacgacccgggcgctgctctccaatgccgggggcgattcgggcctgcagggtggg
tcctcgatcacccagcaattggccaagctcctgtttctgaccaatgagcggacctatgag
cgcaagatcaaggagctgtttctggccttctggctggaagccaatttcaccaaggacgaa
atcttaaagctctatctcgaccgcgcctatatggggggcggcaatgtcggggtgacggcg
gcggccgagttctatttcggcaagcccatccaggatatcgatctcgccgaggccgcaatg
ctggccgggctttacaaggcgccgacccgctgggctcctcatgtcgatatcgctgcggcg
cgcgggcgggccaatgtggtcctcaccaacatggtcaatggaggctatctgaccgaaggc
caggtgacggcagcgcggcgccggccggctgagccggtcgaccgttccgccgaagccaat
tcgcccaactactttctcgactgggcgtttctggaaaccaagcgccttgtgggcgacagc
cccgaggtggggttcgtggtgcgcacaaccatcgatcccgacctgcaggttcatgccgaa
gacgccattatctcggtcctgcgcgaacagggcaccgcttacaatgtgagccagggcgcc
atggtggtcatggagcacaacggcgccgtgcgcgccatggtgggcggcaccgattacgga
cagagccagttcaaccgggcggtggcgcccaaccggcagccgggatcggcgttcaagcca
ttcgtttatgccaccgcgttcgagatgctcgggctcacgccgcgcagcccgatcaccgat
gcaccgatctgtatcggcaattggtgcccgcagaattacgggcgctcgtttcgtggcggg
acgacgatccgcgcggcgatggccgcttcgatcaacagcgttccggttcgcctttccacc
cagaccgggcgtgagccgattgccgaaatggcgcatcgtctcggcatccgcaacgcgttt
ccggtgacccgttcgctggcgctgggcgtggcctcggtgagcgcactcgacatggcttcg
gcctatgcggtgtttgccaatggcggctatcgggcgaccgggttcggggtcacgcgcatc
acgacgttgcgcggcgaagtgatttatgaggccaatcctgacgagaaccgggtgcggctc
cttgatgagcagatcgttttgtcgatgaacgacattctcaacgccgtcaattatggcggc
acgggcggacgcgcggttgtcgagggtgtcccgagtgcgggcaagaccggaacgaccagt
tcgtaccgcgatgcgtggtatgtgggatataccggcaattacgtcgcctcggtctggtac
ggaaacgacaattacacggccatgaacaatctgaccgggggcagtctgccggccatgagc
tggcagaaattcatggcctacgcacacaccaatatcgaagtgaagccggttttcggggtg
gatatggagcctcggcccttcatcatcgcagattcggcaaacggggaagatggcgaacag
gcgcccgagcgcgcgccgaccctggccccggcagcggcgatcaagctgcttgatctgtcg
gaaaaaatgcgccagtcccttgccgttggggggagcggggccatcgatcaggcaacggct
ccagtcgccggcgccaacgaaagtctgtga
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