Pelagibacterium nitratireducens: V6617_13595
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Entry
V6617_13595 CDS
T11031
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00740
Riboflavin metabolism
pnf00790
Folate biosynthesis
pnf01100
Metabolic pathways
pnf01110
Biosynthesis of secondary metabolites
pnf01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
V6617_13595 (ribB)
00790 Folate biosynthesis
V6617_13595 (ribB)
Enzymes [BR:
pnf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
V6617_13595 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
V6617_13595 (ribB)
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Paralog
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
WWT32035
UniProt:
A0ABZ2I397
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Position
complement(2750952..2752034)
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AA seq
360 aa
AA seq
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MISESDTRVQAALDAMKHGQMVVVIDDHDREGEGDIIAAASTITPEQMAFIVRHTSGIVC
APITGERAQKLRLDPMVASNDSAHTTAFTVTIDFKHGTTTGISAEDRTATVRALTNGNVA
AEDFSRPGHIFPLIARRGGVLMRSGHTEAAVDLCRLADLPDVGVICELVNDDGTVTRGQQ
VADFAAAHDLPLISVADLIAYRQRREKLVERVATFEIDTAAGRAIAYAYSTPFDRVQHLA
LVFGDVGQGVPVNVRLQREDIVTDVFGSAEKLNASIAALAETGGVLVYLREGNAGVAYDR
AATEAEREDHGSARDRDAEWREVGLGAQILRDLGISAIKPMSSRSRRYVGLEAFGITISD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgaatccgacacacgcgtccaggcggcgctggacgccatgaagcatggccag
atggtcgttgtgatcgacgatcacgatcgggaaggcgagggcgacatcatagctgccgcg
tccaccatcacgcccgagcagatggccttcatcgtccgccacacctccggcatcgtgtgc
gcgccgatcaccggtgagcgcgcccagaaactgcgcctcgatccgatggtcgcctcaaac
gactccgcccatacgacggccttcaccgtcaccatcgatttcaagcacggcaccaccacc
ggcatttccgccgaggaccgcacggccaccgtgcgcgcgctgaccaatggcaatgtggct
gccgaggatttttcccgccccggccacatcttcccgctcatcgcccggcgcggcggcgtt
ctcatgcgctcgggccatacagaggcggcagtcgatctttgcaggcttgccgatctgccc
gatgtcggtgtgatctgtgagctggtcaatgacgacggtaccgtcacccgcggccagcag
gtcgccgattttgccgcggcccacgatttgccgctgatctcggtcgccgatctcattgct
tatcgccagcgccgcgaaaagctcgtcgagcgcgtcgccaccttcgagatcgacaccgcc
gccggccgcgccatcgcctacgcctattcgaccccattcgaccgcgtccaacaccttgcg
ctggtgttcggcgacgtggggcagggggtgcccgtcaacgtccgcctccagcgcgaggat
atcgtcaccgacgttttcggtagcgcggaaaaactcaacgcatcgatcgctgccctggcc
gaaaccggcggcgtgctggtctatctgcgcgagggtaatgccggcgttgcctatgacagg
gcggcgactgaagccgaacgcgaagaccatggctcagcgcgagatcgcgatgcagagtgg
cgcgaagtcggcctcggcgcccagattttgcgcgatctcggaatctccgccatcaagccc
atgtcctcgcgctctcgccgctatgtcgggctcgaagccttcggcatcaccatttccgat
tag
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