Pelagibacterium nitratireducens: V6617_15910
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Entry
V6617_15910 CDS
T11031
Name
(GenBank) citryl-CoA lyase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf00020
Citrate cycle (TCA cycle)
pnf00630
Glyoxylate and dicarboxylate metabolism
pnf01100
Metabolic pathways
pnf01110
Biosynthesis of secondary metabolites
pnf01120
Microbial metabolism in diverse environments
pnf01200
Carbon metabolism
pnf01210
2-Oxocarboxylic acid metabolism
pnf01230
Biosynthesis of amino acids
Module
pnf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pnf_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
pnf_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V6617_15910
00630 Glyoxylate and dicarboxylate metabolism
V6617_15910
Enzymes [BR:
pnf01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
V6617_15910
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
WWT32476
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All DBs
Position
complement(3238139..3238945)
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AA seq
268 aa
AA seq
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MKIGPNSTRQTSISTATPDQIVIRGKDLCTDLIGKVSFTQHTWLLVTGSMPSDAQTRALD
AALVAIAEHGLVPSVQAARITYAAAPEAVQGAVAAGILGCGSVILGAAEAAGAFLQQCID
AGGDRRSAIEKVVSDLRSQKKAIPGYGHPYHKAHDPRTGRLIEVARELGVFGEHLETALL
AEKVIPEITGRALVLNVSGAIPSLLLDAGYPLLGMKGVPILARTASLIAHILEERSNPIG
FALTEAGSEVISYSGEVPEGFVAQGAGE
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcggtccaaactcgacacggcaaacaagcatttccaccgcaacaccggatcag
atcgtcattcgcggcaaggacctgtgcaccgatttgatcggcaaggtctcgtttacacag
catacttggctgctggtcacaggcagcatgccctccgacgcgcagacaagggcgcttgat
gccgcgctggtggcgatcgccgaacacggcctggtgccttcggttcaggctgcacgcatc
acctatgcagccgcacccgaagcggtgcagggcgccgttgcggccgggattcttggctgc
gggtcggtaattttgggagccgccgaagcggccggcgcattcttgcagcaatgcatcgat
gcgggcggagaccgtcggtcggccatcgaaaaggtcgtgtcggacctgcgtagccaaaag
aaggccattccgggctacggccacccctatcacaaggctcacgatccgaggacgggacgg
ttgatcgaagtcgcgcgggaactgggcgtttttggtgagcaccttgaaaccgcgctgctc
gccgaaaaggtgattcctgaaatcactggtcgtgctttggtgctcaatgtctcgggtgcc
atcccttcgctgctgctcgatgccggctatccgctgcttggtatgaagggcgttccgatc
ctggcgcgaacggcgagcctgatcgctcacatcctcgaagagcgcagcaatcccattggc
tttgccctgaccgaagccgggtccgaggtcatttcctactccggcgaggtgcccgaaggc
ttcgttgcgcaaggggccggggagtga
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integrated database retrieval system