Pelagibacterium nitratireducens: V6617_16915
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Entry
V6617_16915 CDS
T11031
Name
(GenBank) FadR/GntR family transcriptional regulator
KO
K13637
GntR family transcriptional regulator, uxu operon transcriptional repressor
Organism
pnf Pelagibacterium nitratireducens
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnf03000
]
V6617_16915
Transcription factors [BR:
pnf03000
]
Prokaryotic type
Helix-turn-helix
GntR family
V6617_16915
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FCD
GntR
HTH_11
HTH_Crp_2
Fe_dep_repress
HTH_41
Rrf2
TrmB
HTH_IclR
HTH_24
LexA_DNA_bind
MarR
Motif
Other DBs
NCBI-ProteinID:
WWT32667
LinkDB
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Position
3446193..3446963
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AA seq
256 aa
AA seq
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MNRKTAQQGDATITDDFAPRLFAGQRLYQIVARRIARMIEANAGNSGWHMPSERELAEEL
EVSRPVVREAVIALEMRGIVEVRGRAGIMVLPARSGQINFDLAGVDTGPGPFELLEARLA
IESSAAALAAERATSYDIMMLEECIAQMEKETEVVLLQEKGDRDFHMTIAKMTNNAIIIS
MIEALWSQRDESVMWKKLHEHIHAESVRPLWIGDHHSIVSALRMRHPDAAYKAMSRHIRN
VINELLEADERGRFAP
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaaaaccgcccagcaaggagacgcgaccatcacagatgatttcgccccgcgt
ttgttcgctggacagcggctctatcagatcgtcgcgcgccgcatcgcccgcatgatcgaa
gccaatgctggaaattcgggttggcacatgccatcagaacgcgaactggccgaagaactc
gaagtcagccgtccggtggtgcgtgaggcggtgatcgcgctcgaaatgcgcggcatcgtc
gaggtgcgcggtcgggccggaatcatggttctgccggcgcgttccggccagatcaatttc
gacctggccggtgtcgacaccggccctggcccctttgaactgctcgaagcacgactggcg
atcgagtcgagtgcagcggccctggctgcggaacgcgcgacctcatatgacatcatgatg
ctcgaggaatgcatcgcacagatggaaaaggaaaccgaagttgtcctgctccaggaaaag
ggcgaccgcgatttccacatgaccatcgccaaaatgaccaacaatgccatcatcatatcc
atgatcgaggccttgtggagccagcgcgacgaatcggtgatgtggaaaaagctgcacgag
cacatccatgccgagagcgtccggcccttgtggataggagaccatcactcgatcgtctcc
gccctgcgcatgcgccaccccgatgccgcctacaaagccatgtcgcgacacatccgcaat
gtgatcaacgagctattggaagctgacgaaaggggacggttcgctccctga
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