Pelagibacterium nitratireducens: V6617_16970
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Entry
V6617_16970 CDS
T11031
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
pnf Pelagibacterium nitratireducens
Pathway
pnf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
V6617_16970
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pnf02000
]
V6617_16970
Transporters [BR:
pnf02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
V6617_16970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WWT32678
LinkDB
All DBs
Position
3455865..3457397
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AA seq
510 aa
AA seq
DB search
MKTFLKAAAIAALAGISLPSFALAQTEGGTIDVATIGEPPTLDPMTSTADLVGIITQHMF
ETLYTFDANWAVVPLLAADMPEISEDGTVYTIALREGVTFHDGSDMTAEDVVASLERWLR
IASRGMQTAETVESVEAVDDYTVQITLSGSYAPLLSLLSLNNSAAIVIPSEIAGEDVMDD
FVGTGPYQLAERRPDQYIQLTRFDDYASRDEESNGYGGGRHQYLDEIRFVPVPDPNTRIE
GAVAGQFDYVDSIAVEAYDRIASGNTEPVMLAPFGWPVFVMNTAQGVNSDIAVRKAIQAA
LAPQDMLLAAFGSEDFFTADGAMYPEGYVWHTEAGTEPYKPMGDTELAIELLEDSSYDGS
PLRILTSRQYEFHYTMAQVAEAYLEAAGFDVQLDVVEWATLTQRRTDPALWDIYITHSPF
LPEPSLTGIMSDSSPGWWVSDAKHEALGAFNAEADPDARVELWAAVQEAIYEEVPAFKVG
NFNAVAAQSPALEGMNPAPWPYFWNAWLEQ
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttttctcaaggcagcggccatcgctgccctggccggtatctcattgccaagt
tttgcgctcgcgcagaccgaaggtggcacgatcgacgtggccaccattggcgagccgcca
accctcgaccccatgacatcgaccgccgatctggtcggcatcatcacccagcacatgttt
gaaacgctctatacgttcgacgccaactgggccgttgtgccgctgctggcggcggacatg
cccgagatttccgaagacggcacggtctataccatcgcgttgcgcgaaggcgtgacgttc
catgacggctcggacatgaccgccgaggacgttgtcgcatcgctcgagcgctggctgcgc
attgcaagccgcggcatgcagacagcggagaccgtcgagagcgtcgaggccgtggacgat
tacacagtgcagatcacgctgagcgggtcctatgcgccgcttttgtccctgttgtcgctc
aacaattcggcggccattgtcattccgtccgaaatcgccggcgaagacgtcatggacgat
ttcgtcggcaccggcccctatcagttggccgaacgccgcccggatcaatatatccagctt
acccggttcgacgactacgcatcgcgtgacgaagagtccaatggctatggcggcgggcgt
catcagtatctcgatgaaatccggttcgttcccgtccccgatcccaacacccgtatcgag
ggcgctgttgcgggtcagttcgattatgtcgattccatcgccgtggaagcctatgaccgc
atcgcttctggcaataccgagccggtgatgctggcccccttcggctggccggtgttcgtc
atgaacaccgcccaaggcgtcaattccgatatcgcagtgcgcaaggccatccaggcggcg
cttgcgccgcaggacatgctgttggccgcgttcgggtcggaggatttctttaccgccgac
ggggcgatgtatcctgaaggctatgtctggcataccgaggcgggcaccgaaccctacaag
cccatgggcgacacggaactggccatcgagcttctcgaagattcgtcctatgacggttcg
ccgctgcggatcctgacctcgcgccagtacgagttccattacacgatggcccaggtggcc
gaagcctatctcgaagcggccgggttcgatgtgcaactcgatgtcgtggaatgggcaacg
ctgacccagaggcgcaccgatccggcgctgtgggacatctacatcacccactcgcccttc
ctgcccgaaccatcgctgaccggcatcatgtcggactcctcgcccggctggtgggtgtcc
gacgccaagcatgaagcgctgggcgctttcaacgccgaggccgatcccgatgcccgtgtt
gaactctgggcggcggtgcaggaagcgatctacgaggaagtgccagccttcaaggtcggc
aatttcaatgcggttgctgcccaatcgcctgccctcgagggcatgaacccggcgccatgg
ccctatttctggaacgcctggctcgaacaataa
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