Pelagibacterium nitratireducens: V6617_17745
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Entry
V6617_17745 CDS
T11031
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pnf Pelagibacterium nitratireducens
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnf03400
]
V6617_17745 (addA)
Enzymes [BR:
pnf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6617_17745 (addA)
DNA repair and recombination proteins [BR:
pnf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V6617_17745 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
PDDEXK_1
UvrD_C
UvrD_C_2
Terminase_6N
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WWT32823
UniProt:
A0ABZ2HYY1
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All DBs
Position
3623218..3626631
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AA seq
1137 aa
AA seq
DB search
MSQEILRVPPDTNAKQARVAEPRANAWVSANAGSGKTYVLSRRVLRLLLDGAAPEAILCL
TYTKAAAAEMRHRVTGILAGWARAGEAGLEEDLFKLLDYRPSEAEKLRARSLFAHALDTP
GGLKINTIHAFCEAVLQRFPREAGVPVNFTVIEDADATALLREAREGVIAEGLKADGPVG
AAVRALFDALSDSQIETAIGQCLANNRKLGPILADPERAIGAMRASMGLGAGETIEAFNR
QVVDGMLVSTGEFPVIWSLTPPGVAKRAGFEDKLGRIDRAAPTASQLFAAYLTAAGTAPK
RGFPAKAIVTAMPELAERLTAEAERLEGLFEKSKALTIAENSAALTRVLAAILKRYETQK
RARSLMDFDDLVARTAALLGDRGMGEWVRYKLDAGIDHILVDESQDTNPEQWAVIDALVD
DYFSGAGAAQRPKTIFAVGDPKQSIYSFQGAEPKLFLDKGRALAAAARAAGRIWYGETLE
TSFRTLGEILIGVDKVFGRPDIAASLLAETIRHEPARTRTGGRIEIWPVIENPDSPEIPQ
AWPTEPVESLAAAPKQLANRIADTIAGWIERRAPIGPGGRAMRPEDILILVQKRKGIFPE
IVRALKQRNIASPGADRLPVSAHIAIDDLLGLADFLLNPADDLTLAAVLRSPLFAISEEQ
LFTLAHGRGKASLYERLAASGMEAAQAAYERLSGLRQRLDFDRPYEFFAHVLYGQGGLKQ
FHARLGEEVDEVIAEFLDLALEHETSDQPSLTGFVASMRASDIVIKRDLVARAGGVRVMT
VHGAKGLEAPVVILADAATKPRAVSDAVFFGTRDGAAFLLYCPSKDSHCDASRPLRAEVE
ARNVAEYWRNLYVGMTRAEEALHIAGTLDSRTKVEETWFGAVSGALGDESATVCDHRGDV
LRFPAAGAADGAGGQASDDVRASTQPLRLGPPQRRAALPIITPSRHDEVWVPSGLETAAE
SLLDARGARLRGIALHALLQHLSAVPQERREAVALSAAQTLLPDDPELAGPVAARGLAIL
CDPALAGLFGADSRAEVPFSLKVRQGGSEARLEGRIDRLVVGESVLVVDYKSDAGVPGGP
EAVSAGYVRQLALYRLAAQRLFAGKRVEAAILWTENSHLMTIPAGLLDAAVGDVTVL
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagaaatccttcgcgtcccgcccgataccaatgccaagcaggcgcgggtggcc
gagccgcgggccaatgcctgggtttcggccaatgcggggtcgggcaagacctatgtgctc
tcgcgccgggtactgcggctgttgctggatggggctgcgcccgaggccatcctgtgcctg
acctataccaaggcggcggcggccgaaatgcggcaccgggtgacggggattctggcggga
tgggcgcgggccggcgaggccgggctggaagaagatttgttcaagcttttggattaccgc
ccttcggaagccgaaaagcttagggcacggagccttttcgcccatgcgctcgatacgccg
ggcgggctcaagatcaacaccatccacgccttttgcgaggcggtgttgcagcgctttccg
cgcgaggccggcgtgccggtcaatttcacggtcatcgaggacgcggacgccacggcgctg
ttgcgcgaggcgcgcgagggggtgatcgccgaagggctcaaggccgatgggccggtgggc
gcggcggtgcgggcactgttcgatgcgctcagcgacagccagatcgaaaccgcgattggc
caatgccttgccaacaaccgcaagctgggtccgatccttgccgatcccgagcgggcgatt
ggagcgatgcgggccagcatggggctgggcgcgggcgagacaatcgaagcgttcaatcgc
caggttgtggatgggatgctggtttcgacgggcgaatttcccgtgatctggtcgctgaca
ccgcccggcgtcgccaagcgggccgggttcgaggacaagctggggcggatcgaccgggcg
gccccaaccgccagccagcttttcgccgcctatctcaccgcagcagggacggcgcccaag
cgcgggttcccggccaaagccattgtcacggccatgcccgaactggccgagcggctgacg
gccgaggcggaacggctcgaagggctgttcgaaaaatccaaggccctgaccatcgccgaa
aacagcgcggcgctgacaagggttctcgcggcaatcctgaaacgctacgagacgcagaag
cgggcccgctcgcttatggatttcgacgatctggtggcgcgcacggcggcgttgctgggc
gacagaggcatgggcgaatgggtgcgctacaagctcgatgcgggaatcgaccatatcctt
gtcgatgaaagccaggacaccaatcccgagcaatgggcggtgatcgatgcgctggtcgac
gattatttttccggagcgggggcagcgcaaaggcccaagacgatctttgcggtgggcgac
cccaagcaatcgatctattcgtttcagggggccgagccaaaactgtttctggacaaggga
cgcgcgctggcggcggcagccagggcggcggggcgcatctggtacggagagacgctggaa
acaagttttcgcacgctgggggaaatccttatcggtgtggacaaggtgtttggccggccc
gatatcgcagcatcgcttctggccgagacgatccggcatgagccggcgcgaacgcgaacc
ggcgggcggatcgaaatctggccggtgatcgaaaatcccgacagcccggagattccccaa
gcctggccgaccgagccggtggaaagccttgcggcggcgccaaaacaattggcgaaccgg
attgccgatacgattgccggctggatcgaaaggcgggcgccgatcgggccgggggggcgg
gcgatgcggcccgaggatattttgatcctcgtccagaagcgcaaggggatttttcccgag
atcgtgcgggcgctcaaacagcgcaatatcgccagcccaggcgccgaccggttgccggtt
tcggcccatatcgccatcgacgatcttcttgggcttgccgatttcctgctcaatccggcc
gacgatctgacgctggcggcggtcttgcgctcgccgctgtttgcgatttccgaggagcaa
ttgttcacgctggctcatgggcgggggaaggcaagcctttatgaacggctggccgcgagc
gggatggaggccgcgcaggccgcatatgagcggttgagcgggctgcggcagcggctcgat
ttcgatcggccatacgaatttttcgcgcatgtgctgtacggtcagggcgggctgaaacag
tttcatgcgcggctgggcgaggaagtggacgaggtgatcgccgaatttttagatctggcg
ctcgagcacgagacgtccgatcaaccatcgctcaccgggtttgtcgcttcgatgcgggcc
tcggacattgtgatcaagcgcgatctggtggccagagcgggcggcgtgcgggtgatgacg
gtgcatggggccaaggggctcgaagcgcccgtcgtgattcttgccgatgcggcgaccaag
ccgcgggcggtgtccgatgccgtgtttttcggcacccgtgatggcgcggcgttcctgctc
tattgcccgagcaaggacagccattgcgacgcctcgcggccgctgcgggccgaggtggag
gcgcgcaatgtcgctgaatactggcgcaatctttatgtgggcatgacgcgggccgaggag
gcgctccatatcgcggggacgctcgacagccgcaccaaggtggaggaaacctggttcggc
gcggtgtcgggcgctctgggcgacgagagcgccacggtttgcgaccatcggggggacgtg
ttgcggtttccggcggcgggggcggctgacggggcgggcgggcaggcgagcgatgatgtg
cgtgcctcaacgcaaccgctgaggttggggccaccgcaaaggcgcgcggcgttgccgatc
atcaccccgtcgcggcacgatgaggtctgggtgccgtcggggctggaaacggcagcggaa
agtctgctcgatgcgcgcggggcgcggctgcggggcattgcgctgcacgcgctgctgcag
catttgagtgccgtacctcaggagcggcgcgaggccgtggcgctgagcgcagcgcagacg
ctcttgcccgacgatcccgaacttgccgggccggtggccgcgcgggggctggcgatcctt
tgcgatccggcgttggccggtctgttcggagctgacagccgcgccgaggtgccgttctcg
cttaaagtgcggcagggcgggtccgaggcgcggcttgaggggcggatcgaccggctggtg
gtcggggagagcgttctggtggtcgattacaagtccgatgcgggggtgccgggcgggccg
gaggcggtttcggcggggtatgtgcgccagttggcgctataccggctggcagcgcagcgc
ctgtttgcgggaaagagggtcgaggcggcgatcctgtggacggaaaattcgcacctcatg
accattccagccggtctgctcgatgcggctgtgggcgacgtcacggtgctgtga
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integrated database retrieval system
