Pelagibacterium nitratireducens: V6617_18030
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Entry
V6617_18030 CDS
T11031
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnf Pelagibacterium nitratireducens
Brite
KEGG Orthology (KO) [BR:
pnf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnf03016
]
V6617_18030 (truB)
Enzymes [BR:
pnf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
V6617_18030 (truB)
Transfer RNA biogenesis [BR:
pnf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
V6617_18030 (truB)
Prokaryotic type
V6617_18030 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WWT32878
LinkDB
All DBs
Position
complement(3674410..3675321)
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AA seq
303 aa
AA seq
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MSQAQKKRVKRDLSGWLVFNKPYDMSSTEAVGKLRWLYGAKKAGHAGTLDPLATGILPIA
FGEATKTVPIVQDGTKVYHFDIVWGQATSTDDIEGEVIANSEVRPTEQALEAVLPRFIGL
ITQIPPAFSAIRIGGERAYDLARAGHTLEMPSREVEIDALEVIAHAPERSKLSVTCSKGT
YVRALARDIAEALGTRGHVGALHRARVGNFSDADAVTLETIESVELPARDGLLLPIAAGL
ADLPEIRLDARQAATIRLGNPVLLTGRDAPIALDEAWASLKGEAVALGFVQAGQFKPRRV
ILG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgagccaagctcaaaaaaagcgcgtcaagcgcgacctgtccggctggcttgtgttcaac
aagccctatgacatgagctccaccgaagcggtaggcaagctgcgctggctctatggcgcc
aaaaaagccggtcacgccggcacgctcgatccgctggccaccggcatccttcccattgct
ttcggtgaggccacaaagaccgtgcccatcgtccaggacggcaccaaggtctatcatttc
gatatcgtctggggccaggccacctcaaccgacgatatcgaaggcgaagtgatcgccaac
tccgaagttcgccccaccgaacaagcgctcgaggccgtcctgccgcggtttatcggattg
atcacccagatcccgcccgccttttcggccatcaggatcggcggcgagcgcgcctatgat
ctggcccgcgccggccacaccctcgaaatgccgtcccgcgaggtcgaaatcgacgccctc
gaagtgatcgcgcacgcccccgagcgcagcaaactctcggtcacctgttccaagggcacc
tatgttcgcgccctggcccgcgacattgccgaggcgctcggaaccaggggccatgtcggc
gctttgcaccgcgcccgggtgggcaatttctccgatgctgacgccgttaccctcgaaacg
atcgaatccgtagagcttccggcccgcgatggcttgctgctgcccattgccgccgggctg
gccgatctgcccgaaatccgtctcgatgcccgacaggccgcaaccataaggctgggaaac
ccggtgctgttgaccggccgcgacgcccccatcgcccttgacgaggcatgggcatcgctc
aagggcgaggcggtggcgctcggctttgtccaggcgggccagttcaaacccaggcgggtt
attctgggctga
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