Pelagibacterium nitratireducens: V6617_18090 Help Entry V6617_18090       CDS       T11031                                  Symbol rpoN Name (GenBank) RNA polymerase factor sigma-54   KO K03092   RNA polymerase sigma-54 factor Organism pnf  Pelagibacterium nitratireducens Pathway pnf02020   Two-component system pnf02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:pnf00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     V6617_18090 (rpoN)  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     V6617_18090 (rpoN)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pnf03021]     V6617_18090 (rpoN) Transcription machinery [BR:pnf03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      V6617_18090 (rpoN) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_21 HTH_IclR HTH_32 Motif Other DBs NCBI-ProteinID:  WWT32888 UniProt:  A0ABZ2I4V6 LinkDB All DBs Position 3683231..3684730 Genome browser AA seq 499 aa AA seqDB search MALSPRLDVRQTQTLTLTPQLMASIRLLQLSHLELSAFVDAELMRNPLLESTDAPDGDTP MERERAEEIDPYRDVVDYSDHLGSATSIANSFDTEASNLFPEQSGQDSLSQSSSWPEGKG GALGGEAPDIDQYVSAQISLADHLADQVNLIVNDPAERLIARSLVDNLDERGYLMAEIDQ IAEQLGADAGTVEAVLGKVQGCEPLGVFARSLSECLSIQLAEKDRLDPMMAGLLAHLDLV ASHDLALLGKKIGADREDIFDMLAELRELDPRPGRAFDFSPVQSVVPDVFVKRGNDGGWQ VELNSDVLPRVLVNRVYYASISKKTRDPEEKTFLVDCLNTANWLTKSLDQRAQTILKVAT EIVKQQDGFLRHGVSHLRPMTLKAVATEIEMHESTVSRVTANKYIATPRGLFEMKYFFTT ALNSSSGGDDHSAEAVRHRIRQLIEGEKPEAILSDDTIAEMLKREQGIDVARRTVAKYRE GMGIASSVIRRRQKKAQMA NT seq 1500 nt NT seq  +upstreamnt  +downstreamnt atggcgctgtcgccacggctggatgtccggcaaacccagacattgacgctgacgccgcaa ctgatggcgtcgatccggctgttgcagctgagccatcttgagctgagcgctttcgtcgat gccgagctgatgcgcaatccgctgctcgaaagcaccgatgcgcccgatggcgatacgccc atggagcgcgagcgggccgaggagatcgacccctatcgcgacgttgtcgactattccgat catctgggcagcgcaacgagtatcgcgaacagtttcgataccgaggcttccaaccttttt cccgagcagtcagggcaggattcgctgagccagtcgagctcgtggcccgaaggcaagggc ggcgcgttgggcggcgaggcgcccgatatcgaccaatatgtgtctgcccagatctcgctg gccgaccatctggccgatcaggtcaacctgatcgtaaacgaccccgccgaacggctgatc gcccgcagcctcgtcgataacctcgacgagcgcgggtatctgatggccgagatcgaccag atcgccgagcagctcggtgccgatgccggaaccgtcgaggccgtgctgggcaaggtgcag gggtgcgagccgcttggggtttttgcgcgctcgctttcggaatgcctgtctatccagctg gccgaaaaggacaggctggatcccatgatggccgggctgctggcccatctcgatctggtg gccagtcacgatctggcgctgctgggcaaaaagatcggggcggaccgcgaggatattttc gacatgctggccgaattgcgcgaactcgatccacgtccaggccgggcgttcgatttttcg ccggtgcaatcggtggtgcccgatgtgttcgtcaaacgcggcaatgacggcggatggcag gtcgagctcaattccgacgtgctgccgcgggttctggtcaaccgggtctattatgcctcg atttccaaaaaaacccgcgacccggaggaaaagaccttccttgtcgattgtctcaatacg gcgaactggcttaccaagagcctcgaccagcgtgcccagacgatcctaaaagtggccacc gaaatcgtcaaacagcaggacgggttcctgcggcacggcgtttcccatctgcggccgatg acgctcaaggccgttgccaccgagatcgagatgcacgaatcgacggtgtcgcgggtgacg gcgaacaaatatatcgcgacgccgcgcgggctgttcgagatgaaatatttcttcacgacc gcgctcaattcctcctcgggcggcgacgatcattcggccgaggcggtgcgccaccgtatc cgccagctgatcgagggagaaaagcccgaggcgatcctgtcggacgacacgattgccgaa atgctcaagcgcgaacagggaatcgatgtggcccgccggaccgttgccaagtaccgcgaa ggcatgggcattgcctcctcggtgatccggcgccgccagaagaaggcacagatggcgtag

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