KEGG   Pelagibacterium nitratireducens: V6617_18760
Entry
V6617_18760       CDS       T11031                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
pnf  Pelagibacterium nitratireducens
Pathway
pnf02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pnf00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    V6617_18760 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pnf02044]
    V6617_18760 (trbB)
Enzymes [BR:pnf01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     V6617_18760 (trbB)
Secretion system [BR:pnf02044]
 Type IV secretion system
  Trb secretion system protein
   V6617_18760 (trbB)
SSDB
Motif
Pfam: T2SSE AAA_19 ResIII AAA_30 AAA_28 nSTAND3 DEAD AAA_22 FtsK_SpoIIIE AAA_7 AAA_16 RsgA_GTPase DUF87 TrwB_AAD_bind PhoH Sigma54_activat GTP_EFTU AAA_29 AAA_23 MoCF_biosynth SLFN-g3_helicase TsaE ABC_tran ABC_ATPase nSTAND_NTPase5 GpA_ATPase NACHT MMR_HSR1 cobW ATPase P-loop_TraG IstB_IS21 Bac_DnaA Zeta_toxin RNA_helicase AAA_18 NB-ARC NTPase_1
Other DBs
NCBI-ProteinID: WWT34781
UniProt: A0ABZ2I8H0
LinkDB
Position
unnamed:117396..118376
AA seq 326 aa
MSESLRRLVFSLRDSLGATITAALDDEQVVEVMLNPDGKLFIERAGQGIVHAGMMLPSDA
EIVIGKVAHALITEVHRNRPIISGELPLGGHRFEGILPPAAPKPMFTIRKRASMLFRLDR
YVADGIMTPGQVEVIREAITNRLNIVISGGTGTGKTTLTNAILAELVEVTPDHRLVILED
TAEIQCSAKNHVSLHTTDTVDMGRLLKSTMRLRPDRIIVGEVRDGAALTLLKAWNTGHPG
GVTTVHSNSALAALTRLEQLVAEVSTQPMPEVIGEAVDLIVSIERAPQGRVVREILKVDG
FRNGTYQTRPIGNPKSDSMQGKLHVA
NT seq 981 nt   +upstreamnt  +downstreamnt
atgagcgaatccctgagaaggttggtcttcagcctgcgcgactcccttggcgcgacgatc
actgctgcactcgatgacgagcaggtcgtcgaggtgatgctaaaccctgatggcaaactg
tttatcgaacgggcagggcaggggatcgtgcatgctggcatgatgctgccctctgacgcc
gagatcgtcatcggcaaggtggcccacgcgctaataaccgaagtgcaccgaaaccgccct
atcatttccggggagcttccgcttggcgggcatcgctttgagggcattctgccgccggct
gcgccgaaacccatgttcaccatccgaaagcgggcctcgatgctgttccggctcgatcgc
tatgttgccgatggcatcatgacgccgggccaggtcgaggtcatccgcgaagcgatcacg
aaccggctcaatatcgtgatctctggcggcaccggcaccggcaaaaccaccctgaccaac
gcaattctggcagagctggtcgaggtcacgccggatcatcgtctggtgatccttgaggac
accgccgagatccagtgttcggcaaagaaccatgtgtccctgcacaccaccgatacggtc
gatatgggccgtttgctgaaatcgacgatgcggctccgtccggaccgcatcatcgtgggc
gaggttcgcgacggtgcggccctgacgctcctaaaggcgtggaacaccggccatccgggc
ggagtgacgacggttcactccaattcggctctcgcggctttgacccgcctcgagcagctt
gttgcggaagtgtccacgcaaccgatgcccgaagtcatcggggaggcggttgatctgatc
gtttccatcgagcgcgcgccgcaaggccgcgtggttcgggaaatcctcaaggtcgatggg
ttccgtaatggaacctaccagacgaggccgattggcaatccaaaatccgacagtatgcag
ggaaagctccatgtcgcgtaa

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