Pseudoalteromonas nigrifaciens: PNIG_a0014
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Entry
PNIG_a0014 CDS
T05271
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00071
Fatty acid degradation
png00280
Valine, leucine and isoleucine degradation
png00310
Lysine degradation
png00362
Benzoate degradation
png00380
Tryptophan metabolism
png00410
beta-Alanine metabolism
png00640
Propanoate metabolism
png00650
Butanoate metabolism
png00907
Pinene, camphor and geraniol degradation
png00930
Caprolactam degradation
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
png01120
Microbial metabolism in diverse environments
png01200
Carbon metabolism
png01212
Fatty acid metabolism
Module
png_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PNIG_a0014 (fadB)
00650 Butanoate metabolism
PNIG_a0014 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PNIG_a0014 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PNIG_a0014 (fadB)
00310 Lysine degradation
PNIG_a0014 (fadB)
00380 Tryptophan metabolism
PNIG_a0014 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PNIG_a0014 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PNIG_a0014 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PNIG_a0014 (fadB)
00930 Caprolactam degradation
PNIG_a0014 (fadB)
Enzymes [BR:
png01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PNIG_a0014 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PNIG_a0014 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PNIG_a0014 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PNIG_a0014 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Phage_T7_tail
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASM52377
UniProt:
A0AAC9UET1
LinkDB
All DBs
Position
I:complement(12648..14807)
Genome browser
AA seq
719 aa
AA seq
DB search
MLYKSDSFEVSFIKENIAEFKFCATASVNTLSQQTLSDCATALKQLAANTDIKGMIFTSD
KEHFIIGADVFEFLPIFTRSEAELVTWIKEATDVFDAIEDLPFPTLSAVNGLALGGGCEW
VLATDYRVASETAQMGLPEVTLGIMPGFGGTVRLPRIIGADNAMMWITSGSTNRAADALK
VGAFDAVVSADKLIESSVSTLELAIAGKLDWQAKRNVKLQPLKLNRVEQGMSFAMAEGMV
MAKTKGHYPAPVMAVKTIKAAANCTRDEAMAIENANFAKLAGTPEVAAQIGIFLADQYIK
GKSRKLAKQSDVEIKQAAVLGAGIMGGGIAYQSAYKGTPIIMKDIQQDALDLGMGEASKL
LGQKVKRGHMSMEKMLGTLSKIKPTLNDSDLQSADIIVEAVVENPKVKQAVLAELEKTMP
EGTVLTSNTSTICIDLLAEALDKPENFCGMHFFNPVPKMPLVEIIRGAKTSDKTINAVVD
YALKLGKSPIVVNDCPGFFVNRVLFPYFAGFSKLVVEGANFAKVDKVMENVFGWPMGPAY
LLDVVGIDTAFHCTGVMADGFPERMARADKDPVTIFANEKRFGQKNKAGFYKYETDRRGR
LKKSHDETAIELLKPITEAEKAFDKQEIIDRCMIPMLNEVLLCLQEGIVASPQEADMALV
YGVGFPPFRGGAFRYLDQTGLANFVATADKYAHLGAIYQVSEQTRQWAEEGRVFYKVEG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaaagcgattcctttgaagttagcttcataaaggaaaacatcgccgagttt
aagttttgtgctacagcttctgtaaacacactatctcagcaaaccctttcagattgcgca
acagcattaaaacaattagctgcaaatactgatataaaaggcatgatttttaccagtgat
aaagaacactttattattggtgccgacgtattcgaatttttacctatatttactagatct
gaagcagaactagtaacttggataaaagaagccactgacgtttttgacgctatcgaagac
ttaccattcccaactctaagcgctgtaaatggcttagcacttggcggtggctgtgagtgg
gtacttgctaccgattatcgtgtagcaagcgaaactgcacaaatgggtcttccagaagta
acccttggcataatgcctggttttggtggcacagttcgcttaccgcgtattattggtgcc
gataacgccatgatgtggattacctcaggttctactaaccgcgcagcagatgcccttaaa
gtaggtgcttttgacgcagtagttagtgctgacaaacttatagagtcaagtgtatcaaca
cttgaattagcaattgctggcaagctcgattggcaagcaaaacgcaatgtaaagctacaa
ccacttaaattaaaccgtgttgagcaaggcatgagctttgcaatggctgaaggcatggta
atggctaaaactaaaggccactatcctgcacctgtaatggctgtaaaaaccattaaagca
gctgctaactgtactcgtgatgaagcaatggcaatcgaaaatgccaactttgctaaatta
gcaggcacgccagaagttgccgcgcaaattggtatatttctagccgaccagtacattaaa
ggtaaatcacgtaaacttgctaaacaaagcgatgtagaaattaaacaagctgcagtgtta
ggtgctggcattatgggcggcggtattgcataccagtctgcttataaaggtacacctatt
ataatgaaagatatccaacaggatgcacttgacttaggtatgggcgaagcctctaagtta
cttggccaaaaagttaaacgtggccatatgtcgatggaaaaaatgcttggtacgctaagc
aaaattaaaccgacccttaatgattctgatctacaaagtgccgatattattgttgaagcc
gtagtagagaaccctaaagttaagcaagcagtacttgcagagcttgagaaaaccatgcca
gagggcacggtacttacctcaaacacttcaactatttgtattgatttacttgcagaagcg
ttagataaaccagaaaacttctgtggtatgcacttttttaacccagtaccgaaaatgccg
ttagtagaaattatccgtggtgcaaaaacctctgataaaaccattaacgccgtagttgat
tacgcgcttaaattaggcaagtctcctattgttgttaacgattgccctggcttttttgta
aaccgtgttttattcccttactttgcaggttttagcaaattagtagttgaaggtgctaac
tttgcaaaagtagataaagtaatggaaaacgtatttggctggcctatgggtccggcttac
ttacttgatgttgtaggtattgataccgcttttcattgtactggcgtaatggccgatggc
ttccctgagcgcatggcgcgtgcagataaagacccagtgactatttttgctaacgaaaag
cgttttggccaaaagaacaaagctggtttttataagtacgaaacagatcgtcgcggtcgt
cttaaaaaatcgcatgacgaaactgcaattgagctacttaagccaattactgaagcagaa
aaagcattcgataaacaagaaatcattgaccgttgtatgatcccaatgcttaacgaagtg
ctactttgtttacaagaaggcattgttgcatcaccacaagaagctgatatggcacttgtt
tacggtgttggtttccctccatttagaggcggcgcgttccgttacttagatcaaaccggt
ttagctaactttgtggcaactgccgacaaatatgctcacttaggtgcgatttatcaagta
tcagagcaaactcgtcaatgggccgaagaaggtcgtgttttctataaggtggaaggttaa
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