Pseudoalteromonas nigrifaciens: PNIG_a0027
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Entry
PNIG_a0027 CDS
T05271
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine967-C5)-methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
png03009
]
PNIG_a0027 (rsmB)
Enzymes [BR:
png01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
PNIG_a0027 (rsmB)
Ribosome biogenesis [BR:
png03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
PNIG_a0027 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
Methyltr_RsmF_N
Methyltransf_11
FtsJ
Motif
Other DBs
NCBI-ProteinID:
ASM52388
UniProt:
A0AAC9UEN4
LinkDB
All DBs
Position
I:complement(24099..25394)
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AA seq
431 aa
AA seq
DB search
MSNVPNVRALAAETLYNVVDKGASLNQELPFASQGLPPKDKALLQQICYGVLRYLPSLEN
YCQHLVEEPLKGKRRIFQFLLYVGIYQLQHMRVPPHAAISETVNALQQLRALGLKGLINA
ILRSFQRQQLELEEKAKLIPVCLYNHPNWFIKQVKEAYPDSWEDLLAENQQQAPMWLRVN
QAQYSTQEYSDMLTANDIEHTLNPDFIDGIKLAKPRDVFSLPEFDTGACSVQDAAAQLAA
RFLEPKDDDTILDACAAPGGKTCHILELADAEVLALDSDATRLERVKQNLTRIGLGADLQ
CGDASQPHTWWDEKQFDRILLDVPCSATGVIRRHPDIKWLRRASDIADLAALQGDILDSI
WPLLKPGGTLVYATCSVLPQENQQQVAKFLANNNDVEHIPLHDKDTPTTPGLQLLPGESD
GFYYAKLVKKI
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatgttccaaacgtacgagcgcttgccgctgaaactttatataacgtagttgat
aaaggcgcttcgcttaatcaagaactaccatttgccagccaaggcttgccacctaaagat
aaagccctgctacaacaaatttgctatggcgttttacgctatttaccaagccttgaaaac
tactgccaacatttagttgaggagccgttaaaaggtaagcgtagaatatttcagttttta
ttgtatgtgggcatttaccaactacaacacatgcgtgttccgccacatgcggcaatttca
gaaactgtaaatgcactacaacaattgcgtgctttgggtttaaaaggacttattaacgct
attctacgtagttttcagcgccaacaacttgagcttgaagaaaaagccaaacttattccg
gtgtgtttatacaatcatccaaactggtttatcaaacaagttaaagaagcttatcctgat
agttgggaagatctgcttgcagaaaaccaacagcaagcgcctatgtggctgcgtgtaaat
caagcgcaatacagcacgcaagaatacagcgatatgctaacagctaacgatattgagcat
acacttaaccctgattttatagatgggataaagttagctaaaccacgagatgtattttca
ttacccgagtttgataccggtgcttgttctgtacaagatgctgctgcacagttagctgcg
cgctttttagagcctaaagatgacgacactattttagatgcctgcgccgcgccgggtggc
aaaacctgtcatattttagaattggccgatgctgaggtacttgcccttgatagcgatgca
actcgcctagagcgtgttaagcaaaacttaactcgtataggcttaggtgccgacctacaa
tgtggtgatgcatcacaaccacacacttggtgggatgaaaaacagtttgatcgtatttta
ctcgacgtaccttgctcggctaccggtgttattcgccgccaccccgatataaagtggttg
cgtcgtgcatcagacattgccgatttagcagcattacaaggcgatatactcgatagtatt
tggccgcttctaaagccaggtggcaccttggtatacgctacttgttcagtactccctcaa
gaaaaccaacaacaagttgctaagtttttagctaataacaatgatgttgagcatattcct
ctacatgataaagacacgcccaccacacctggtttacagttacttcctggtgaaagcgat
ggcttttattacgctaaactagttaaaaaaatataa
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