Pseudoalteromonas nigrifaciens: PNIG_a0094
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Entry
PNIG_a0094 CDS
T05271
Symbol
ycaO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
png03009
]
PNIG_a0094 (ycaO)
Ribosome biogenesis [BR:
png03009
]
Prokaryotic type
ribosomal protein modification factors
PNIG_a0094 (ycaO)
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GFIT
Motif
Pfam:
YcaO
YcaO_C
EAL
Motif
Other DBs
NCBI-ProteinID:
ASM52443
UniProt:
A0AAC9XWA6
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Position
I:complement(82906..84666)
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AA seq
586 aa
AA seq
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MTDKTFIKGKDRDLESSISTMQNKLKALNINIEEALWLNPVANCYSVHIRDQDCGVMFTN
GKGANDKASLASALGEYFERLSCNYFFADFYLGEEFAHAEFTHYPTEKWFTVTNDEVPEG
IMDESLWDYFDPERELNASHLFDFNSGNVKRGICTVPYTRQSDNQDVYIPVNVIGNIFVS
NGMSAGNTKFEARVQGLSEVFERAIKSRIITEGLCLPIVPEEVVKLYPKIHEACEELRSH
GFHLRIADASLGGKYPVMSVTLIHPADGSVFASFGAHPSFEVALERTVTELLQGRRLDQL
DVFQPATFDNDEVASPENTELHFIDSSGLISHDFFRAKADFDFVHWDFSGTTEQEYNFCT
DLIHSMGHDIYIMDYTHLNVYACRILVPGMSDIYPVDELIWRNNNEGAKFRETFLSLDQY
DVEQWMEIYDSLEEAGHSDIIRVAEFIGLVTNPDTSWDTLRIGELKAHLCLAAGNEEAID
WVDWILHTGQVNEDAMRHFRCLKAILEIKYDDEREYADYQDALGLMFGTANVTLAIEIAE
GRKLFNGLTFPGLSLTGFTKHAALLDGYRKLHVAKQQHWAREVSDS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaacatttataaaaggtaaagaccgcgatttagaatcgtcgatctctact
atgcaaaataagctaaaagcccttaatattaatattgaggaagcgttatggcttaaccct
gtagctaactgttattcggtacatattcgtgaccaagactgtggcgtaatgtttaccaat
ggtaaaggcgcaaacgacaaagcatcgttagcttcggcattaggtgaatactttgaacgc
ttaagctgtaactacttttttgctgacttttatttaggtgaagaatttgcccatgcagag
tttacccattacccaaccgaaaagtggtttacagtaacaaacgatgaagtgcctgagggc
attatggatgaaagcttatgggactactttgacccagagcgcgaacttaatgcatcgcac
cttttcgattttaactctggtaatgttaagcgtggtatttgtactgtgccatacacccgc
caaagcgataaccaagatgtgtatattccggttaacgttattggtaatatttttgtatct
aacggtatgagtgccggcaatactaaatttgaagcacgggtacaaggcttatccgaagta
tttgaacgcgctataaaaagccgcattattactgagggcttgtgtctgcctatcgtgcct
gaagaagtagttaagctgtaccctaaaattcatgaagcgtgtgaagagttacgcagccat
ggttttcacttacgtattgccgatgcctctctaggcggtaaatacccagtaatgagcgtt
acccttattcacccagctgatggctctgtatttgcttcttttggtgctcacccatcgttt
gaagtggcacttgagcgtaccgtaacagaactattacaaggtcgtcgtttagatcaactt
gatgtgttccaacctgctacttttgataatgatgaagttgcctctcctgaaaacactgag
ctgcactttattgattctagtggcttaatttctcatgactttttccgcgcaaaagccgac
tttgactttgtgcattgggactttagcggcacaactgagcaagaatataacttttgtacc
gacttaattcatagcatggggcatgatatttacatcatggattacacccacttaaacgta
tatgcatgtcgtattctagtccctggtatgtcagacatttacccagttgatgaactaatt
tggcgtaacaacaatgaaggcgctaagttccgcgaaacatttttatcacttgatcagtac
gacgttgagcaatggatggaaatttatgactcactagaggaagcgggtcatagcgatatc
attcgcgttgccgagtttattggtttagtaaccaaccctgatacatcttgggatacactg
cgtattggtgaactaaaagcgcacctttgcctagccgcaggtaacgaagaagccattgat
tgggttgactggatattacataccgggcaagtaaacgaagatgcaatgcgtcactttcgc
tgtttaaaagctattttagaaataaaatacgatgacgaacgcgaatatgcagactatcaa
gatgcattaggcttaatgtttggtactgccaatgtaacgctcgcaattgaaatagccgaa
ggccgtaaattatttaacggtttaaccttcccaggcttatcgcttactggctttacaaag
catgctgcattactcgatggttatcgcaagctccatgtagctaaacagcagcattgggca
cgcgaggttagcgactcgtaa
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