Pseudoalteromonas nigrifaciens: PNIG_a0114
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Entry
PNIG_a0114 CDS
T05271
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00300
Lysine biosynthesis
png00470
D-Amino acid metabolism
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
png01120
Microbial metabolism in diverse environments
png01230
Biosynthesis of amino acids
Module
png_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PNIG_a0114 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PNIG_a0114 (lysA)
Enzymes [BR:
png01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PNIG_a0114 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ASM52458
UniProt:
A0AAC9XWA9
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All DBs
Position
I:complement(96746..97999)
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AA seq
417 aa
AA seq
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MDFFNYKNNQLFAEDVSIASIAQQYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK
ANSNIAVLNILARLGSGFDIVSKGELARVIKVGGDASKVVFSGVAKTADEIAYALKLGIK
CFNVESVSELERISEVACELNLAAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS
VYQHAASLPGLNIIGVDCHIGSQLTETRPFLEALDKLLTLIDELKACNIELTHLDIGGGL
GVTYNDEQPPHPSEYAAQVTERLVNYRHLELIFEPGRAIAANAGVLVTQVEFIKQNQDKY
FAIVDAGMNDMLRPALYQAWQKIIPVSVRDDETPTHNFDIVGPVCETGDFLGKDRELALK
QGDLLVQRSAGAYGFTMSSNYNSRPRVAEIMVDGSQHHLIRERETIESLYQGEKILP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttaattataaaaacaatcaattatttgctgaagacgtaagcattgcaagt
attgctcagcaatatggtacgccatgctacgtttattcgcgagccacctttgagcgccat
tatttagcctttgctaatgctactaaaaatcataaatccctggtgtgctacgccgttaaa
gccaactctaatattgcggtactcaatatattagcgcgtttagggtcgggcttcgacatt
gtatctaagggtgaactggcgcgagtaattaaagtcggtggcgacgcctccaaagtggtg
ttttcgggtgtggctaaaacagcagacgaaatagcctatgcattaaagctcggaattaaa
tgctttaatgttgagtcggtctcggagctagaacgtatttcagaagtggcctgtgagcta
aatttagcagcgcctatttctattcgcgttaaccccgatatagatgcaaaaacgcatccg
tatatttctaccggcttaaaagaaaacaagtttggtatagatattcaaacagctgtgagc
gtgtatcagcatgccgcttcactgcctggattaaacattattggcgttgattgccacatt
ggctcgcaactcaccgaaaccagaccttttcttgaagcacttgataagctactaacgcta
atagatgaattaaaagcgtgtaacatcgagcttacccatttagatataggcggtggttta
ggggtaacttataatgacgagcaacctccgcaccctagcgaatatgcagcgcaagttact
gagcgcctagttaattatcgccaccttgagcttatatttgaacccggtcgcgccattgct
gctaacgcaggagttttagttactcaagttgaatttattaaacaaaaccaagataagtac
tttgctattgttgatgcaggcatgaacgacatgctgcgcccagcgctttatcaagcatgg
caaaaaatcattccggtatcggtacgcgacgacgaaacccctactcataactttgatatt
gttggccctgtttgcgaaactggtgactttttaggtaaagaccgcgagttagcacttaaa
caaggcgacttactggtacaaagaagtgccggtgcttatggctttactatgagttcaaat
tataactcgcgtccgcgtgttgcagaaataatggtagatggcagtcaacaccatcttatt
cgcgaacgcgaaaccatagagagcctgtatcaaggtgagaaaattttaccttaa
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