KEGG   Pseudoalteromonas nigrifaciens: PNIG_a0114
Entry
PNIG_a0114        CDS       T05271                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
png  Pseudoalteromonas nigrifaciens
Pathway
png00300  Lysine biosynthesis
png00470  D-Amino acid metabolism
png01100  Metabolic pathways
png01110  Biosynthesis of secondary metabolites
png01120  Microbial metabolism in diverse environments
png01230  Biosynthesis of amino acids
Module
png_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:png00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PNIG_a0114 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PNIG_a0114 (lysA)
Enzymes [BR:png01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     PNIG_a0114 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N AAA_11
Other DBs
NCBI-ProteinID: ASM52458
UniProt: A0AAC9XWA9
LinkDB
Position
I:complement(96746..97999)
AA seq 417 aa
MDFFNYKNNQLFAEDVSIASIAQQYGTPCYVYSRATFERHYLAFANATKNHKSLVCYAVK
ANSNIAVLNILARLGSGFDIVSKGELARVIKVGGDASKVVFSGVAKTADEIAYALKLGIK
CFNVESVSELERISEVACELNLAAPISIRVNPDIDAKTHPYISTGLKENKFGIDIQTAVS
VYQHAASLPGLNIIGVDCHIGSQLTETRPFLEALDKLLTLIDELKACNIELTHLDIGGGL
GVTYNDEQPPHPSEYAAQVTERLVNYRHLELIFEPGRAIAANAGVLVTQVEFIKQNQDKY
FAIVDAGMNDMLRPALYQAWQKIIPVSVRDDETPTHNFDIVGPVCETGDFLGKDRELALK
QGDLLVQRSAGAYGFTMSSNYNSRPRVAEIMVDGSQHHLIRERETIESLYQGEKILP
NT seq 1254 nt   +upstreamnt  +downstreamnt
atggatttttttaattataaaaacaatcaattatttgctgaagacgtaagcattgcaagt
attgctcagcaatatggtacgccatgctacgtttattcgcgagccacctttgagcgccat
tatttagcctttgctaatgctactaaaaatcataaatccctggtgtgctacgccgttaaa
gccaactctaatattgcggtactcaatatattagcgcgtttagggtcgggcttcgacatt
gtatctaagggtgaactggcgcgagtaattaaagtcggtggcgacgcctccaaagtggtg
ttttcgggtgtggctaaaacagcagacgaaatagcctatgcattaaagctcggaattaaa
tgctttaatgttgagtcggtctcggagctagaacgtatttcagaagtggcctgtgagcta
aatttagcagcgcctatttctattcgcgttaaccccgatatagatgcaaaaacgcatccg
tatatttctaccggcttaaaagaaaacaagtttggtatagatattcaaacagctgtgagc
gtgtatcagcatgccgcttcactgcctggattaaacattattggcgttgattgccacatt
ggctcgcaactcaccgaaaccagaccttttcttgaagcacttgataagctactaacgcta
atagatgaattaaaagcgtgtaacatcgagcttacccatttagatataggcggtggttta
ggggtaacttataatgacgagcaacctccgcaccctagcgaatatgcagcgcaagttact
gagcgcctagttaattatcgccaccttgagcttatatttgaacccggtcgcgccattgct
gctaacgcaggagttttagttactcaagttgaatttattaaacaaaaccaagataagtac
tttgctattgttgatgcaggcatgaacgacatgctgcgcccagcgctttatcaagcatgg
caaaaaatcattccggtatcggtacgcgacgacgaaacccctactcataactttgatatt
gttggccctgtttgcgaaactggtgactttttaggtaaagaccgcgagttagcacttaaa
caaggcgacttactggtacaaagaagtgccggtgcttatggctttactatgagttcaaat
tataactcgcgtccgcgtgttgcagaaataatggtagatggcagtcaacaccatcttatt
cgcgaacgcgaaaccatagagagcctgtatcaaggtgagaaaattttaccttaa

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