Pseudoalteromonas nigrifaciens: PNIG_a0141
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Entry
PNIG_a0141 CDS
T05271
Symbol
uvrD
Name
(GenBank) DNA helicase II / ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03420
Nucleotide excision repair
png03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PNIG_a0141 (uvrD)
03430 Mismatch repair
PNIG_a0141 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a0141 (uvrD)
Enzymes [BR:
png01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PNIG_a0141 (uvrD)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PNIG_a0141 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PNIG_a0141 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
AAA_11
SAP18
Motif
Other DBs
NCBI-ProteinID:
ASM52482
UniProt:
A0AAC9UEY9
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All DBs
Position
I:complement(132393..134558)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSQLLDGLNDKQRDAVAAPLQNMLVLAGAGSGKTRVLVHRIAWLMQVEQASAYSIFAV
TFTNKAAKEMRTRVEETLKAPVGGMWIGTFHGLSHRILRAHHREAKLPEAFQILDSDDQL
RMIKRLLKSMNIDDKKWPAKQFGWYISAKKDEALRPKDIQAYDINEQMMLRVYAAYQEAC
DRAGLVDFAEILLRSYEVLKNNPTLLRHYQQRFAHMLVDEFQDTNTIQYAWLKLLAGDSN
SIMIVGDDDQSIYGWRGAKIENIKRFLTDFSAETIRLEQNYRSTATILKASNALIQNNSE
RMGKSLWTDGNEGEPISIYAAFNELDEARFVSSKLRSWLNAGNALQDAAILYRSNAQSRV
LEEAMLQEGLKYRIYGGMRFFERQEIKDALSYLRIIGNRQDDAAFERVINTPARGIGDKT
LSHIRDCARAESLPLWYAAKAIVEQQHLSGRASGAVSKFVELVEHIEDKISDLTLHEQAK
YVIQTSGLMAMYQAEKGEKGRARVENLEELISACDQYELPEEEEYSSPLQGFLAHTSLES
GEGQAEEHEDAVQMMTLHSAKGLEFPLVFMVGVEEGMFPSQQSNEESGRLEEERRLCYVG
MTRAMDKLYISHAESRRLYGQEKYHTPSRFLREIPEDCVEEIRIKTQVSRPPAAGRFSAS
VSHAAFEDSGFNLGQRVLHAKFGIGTVLNYEGAGAQSRVQVNFDDLGSKWLVTAYARLQA
I
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacaattactcgatggcttaaacgacaaacaacgcgatgccgttgcagcc
ccactacaaaacatgctggtattagcaggtgctgggtctggtaaaacacgagtgttggtt
catcgtattgcttggctaatgcaagttgagcaagcctcagcgtatagtatttttgcggtt
acctttactaataaagcagctaaagagatgcgtactcgcgttgaagagacgctaaaagcg
ccggttggtggtatgtggattggtactttccatggtttgtcgcaccgtattttacgcgcg
caccaccgtgaagcaaaattacccgaagcatttcaaattttagactcagacgatcagcta
cgtatgatcaaacgtttattaaaatcgatgaatattgatgataaaaaatggcccgctaaa
cagtttggttggtacataagcgctaaaaaagatgaagcacttcgccctaaagatattcaa
gcctacgatattaacgagcaaatgatgctgcgcgtgtacgcggcgtatcaagaagcatgc
gacagagcaggcttagtcgattttgccgaaatactactgcgcagctacgaagtactcaaa
aacaaccctacactactgcgccattatcaacagcgctttgcacacatgttagtagacgag
tttcaagacaccaacaccatacaatacgcatggttaaaactacttgctggcgactccaat
agtattatgattgttggcgatgacgatcagagtatctatggttggcgcggtgcaaaaata
gaaaacattaaacgttttttaactgactttagcgcagagaccattcgtcttgagcaaaac
tatcgctctaccgccactatattaaaagcctcaaatgccctgatccaaaataactcagag
cgtatgggtaaaagcttatggaccgacggtaacgagggcgaacctatttctatttacgcc
gcatttaacgagctagacgaagcgcgttttgtaagtagtaaactgcgtagttggttaaat
gccggcaatgcgctgcaagatgcggctattttatatagaagtaatgcgcaatcacgtgta
ctcgaagaagccatgctacaagaaggcctaaagtatcgtatttatggcggcatgcgattc
ttcgaacgccaagaaattaaagacgccctgtcgtacttacgcataataggtaaccgtcaa
gacgatgctgcatttgaacgagtaattaatactccagctcgtggtattggcgataaaacg
ctaagccatatacgcgactgtgcacgcgccgaatcgttaccactttggtatgcagcaaaa
gcaattgtagagcaacaacatttatctggccgcgcttctggtgcagtgagtaagtttgtc
gaactagtagagcatattgaagataaaattagcgatctaacgctacatgagcaagctaag
tacgttattcaaacttctgggttaatggcaatgtaccaagccgaaaaaggtgaaaaaggc
cgtgcccgagtagaaaacttagaagaacttattagcgcttgcgatcagtacgaattgcct
gaggaagaagaatatagctctcctctacaaggctttttagcgcatacctcgcttgaatct
ggtgaaggacaagcagaagagcacgaagacgccgtacaaatgatgacattgcactcagct
aaaggtttagaatttccgttagtgtttatggttggcgtagaggaaggtatgttcccttct
caacaaagtaatgaagagtctggccgtttagaagaagaacgccgcctttgttatgtaggt
atgacccgcgctatggataaactatatattagccatgccgaaagccgtcgtttatatgga
caagaaaaataccatacaccatcgcgctttttacgggaaattcccgaggactgtgttgaa
gaaattcgtattaaaacccaagtatctcgaccacccgctgcagggcgttttagcgcatca
gttagtcacgctgcatttgaagatagcggctttaacttggggcaacgtgtactgcatgct
aaatttggtattggtacagtacttaattacgaaggtgcgggtgcgcaatctcgcgtacaa
gtcaactttgatgatttaggtagtaagtggttagtaacggcatatgcaagactacaagct
atataa
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