Pseudoalteromonas nigrifaciens: PNIG_a0290
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Entry
PNIG_a0290 CDS
T05271
Symbol
trmA
Name
(GenBank) tRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
png03016
]
PNIG_a0290 (trmA)
Enzymes [BR:
png01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
PNIG_a0290 (trmA)
Transfer RNA biogenesis [BR:
png03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
PNIG_a0290 (trmA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
MTS
Methyltransf_4
TRM5-TYW2_MTfase
Methyltransf_15
PrmA
Methyltransf_12
Methyltransf_11
TcdA_TcdB_pore
DUF7812
DREV
Motif
Other DBs
NCBI-ProteinID:
ASM52622
UniProt:
A0AAC9XW79
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All DBs
Position
I:complement(278878..279981)
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AA seq
367 aa
AA seq
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MAVIKIDTTQYDAQLSEKEQRIAAQFQRFGVDKLEVFSSEPINYRQRAEFRVWHDGDDLF
HIMFDQQTKDKIRVDSFDPAAPLVGEVMQVMIDNLKSCEILRRKLFQIDYLSTLSGEILV
SLLYHKPLDEHWLSEINALKEKLSNKYKIDFIGRARKQKEMLGDDYVTERLNVNGQELIY
QQVENSFTQPNAKVNIKMLEWAQDLCKPLKNDLLELYCGNGNFSIALAGSFNKVLATEIS
KSSVHSAQYNIAQNKVANLDIIRMSSEEFTQAMNGERSFSRLEGIDLNSYNCQTILVDPP
RAGMDTLTCDLVANYESIIYISCNPETLERDLDHLTRTHEVKRFAIFDQFPYTHHIESGV
FLQKKNI
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggcagttattaaaatagacaccacacagtacgatgcgcagttaagcgaaaaagaacag
cgtattgctgcccaatttcaacgttttggtgtggataaacttgaggtatttagctcagag
ccgattaactaccgccaacgcgctgagtttagagtatggcacgatggtgacgatctgttt
catataatgtttgatcaacaaactaaagacaaaattcgcgttgatagctttgaccctgcc
gctcctttggtaggtgaagtgatgcaagtaatgattgataatttaaagtcgtgtgaaatt
ttgcgtcgtaaactatttcagattgattacttatctacgctaagcggtgagattttagtg
agtctgttatatcacaagccacttgatgagcattggctgagtgaaattaacgcgcttaaa
gaaaagttaagcaataagtataaaattgactttattggccgtgcccgcaaacaaaaagaa
atgcttggtgatgactacgttaccgaacgcttaaacgtgaatggccaagaactaatatat
cagcaggtagaaaacagctttacccagccaaatgccaaagtaaatattaaaatgctagag
tgggcgcaagacttatgtaagccacttaaaaatgatttacttgaactttattgtggcaac
ggtaacttttctattgcgttagcgggttcgtttaataaagtgctggcaaccgaaatatca
aagtcgtcggtacactcagcgcagtacaatatagcgcaaaacaaagttgccaatttagat
attattcgcatgtcgagcgaagagtttactcaagccatgaatggcgagcgtagtttttct
cgcttagaaggtatagatttaaacagctacaattgtcaaaccattttagttgatccgcca
cgtgccggtatggatactctaacgtgtgacttagtagcaaattacgaaagtattatttat
atttcgtgtaacccagagacactagagcgcgaccttgatcacttaacccgcacccatgaa
gttaaacgctttgcgatttttgatcaattcccttatacgcaccatattgagtcgggtgta
tttttacaaaaaaagaatatttaa
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