Pseudoalteromonas nigrifaciens: PNIG_a0296
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Entry
PNIG_a0296 CDS
T05271
Symbol
groEL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PNIG_a0296 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
png03019
]
PNIG_a0296 (groEL)
03110 Chaperones and folding catalysts [BR:
png03110
]
PNIG_a0296 (groEL)
03029 Mitochondrial biogenesis [BR:
png03029
]
PNIG_a0296 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
png04147
]
PNIG_a0296 (groEL)
Enzymes [BR:
png01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PNIG_a0296 (groEL)
Messenger RNA biogenesis [BR:
png03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PNIG_a0296 (groEL)
Chaperones and folding catalysts [BR:
png03110
]
Heat shock proteins
HSP60 / Chaperonin
PNIG_a0296 (groEL)
Mitochondrial biogenesis [BR:
png03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PNIG_a0296 (groEL)
Exosome [BR:
png04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PNIG_a0296 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PNIG_a0296 (groEL)
Exosomal proteins of breast cancer cells
PNIG_a0296 (groEL)
Exosomal proteins of colorectal cancer cells
PNIG_a0296 (groEL)
Exosomal proteins of bladder cancer cells
PNIG_a0296 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ASM52627
UniProt:
A0AAC9UGQ6
LinkDB
All DBs
Position
I:complement(290071..291714)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKEVLFAGDARAKMLTGVNILANAVKVTLGPKGRNVVLDKSFGSPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSVPCSDTKAIAQVGTISANSDKEIGDIIAQAMEKVGRNSGVITVEE
GQSLENELDVVEGMQFDRGYLSPYFINSPEKGTVELDNPFILLVDKKISNIRELLPTLEA
VAKASKPLLIIAEDLEGEALATLVVNNMRGIVKVSAVKAPGFGDRRKAMLQDIAVLTGGT
VISEEIGLELEKATVEDLGTAKRVIITKDDTTIIDGAGEEAGINGRVSQIKAQIEEATSD
YDKEKLQERMAKLAGGVAVIKVGAATEMEMKEKKDRVEDALNATRAAVEEGVVPGGGVAL
VRAASKLVDLVGDNEDQNHGIKVALRAMEAPLRQIVTNAGDEASVVINAVKAGSGNFGYN
AATGEYNDMIEMGILDPTKVTRSALQFAGSIAGLMITTEAMVAEIPKDDSAPDMGGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagaagtactttttgcaggtgacgcacgcgctaaaatgctaactggcgta
aacatcctggcaaacgcagtaaaagttacattaggtcctaaaggccgtaacgttgtacta
gataaatcatttggctctccagttatcactaaagatggtgtatctgtagcaaaagaaatc
gaacttgaagacaagtttgaaaacatgggcgcacaaatggttaaagaagttgcatctaaa
gctaacgatgcagccggcgatggtacaactaccgctacagtacttgcacagtctattgta
aacgaaggccttaaagctgttgcagcaggcatgaacccaatggaccttaagcgcggcatc
gacaaagcagtaattgctgctgttgcagagcttaaagcgttatctgttccatgctctgac
actaaagcaattgcacaagtaggtactatttcagctaactctgataaagagattggcgac
atcattgcacaagcaatggaaaaagtaggccgtaacagtggtgttattactgtagaagaa
ggtcaatcactagaaaatgaactcgatgttgttgaaggcatgcagtttgaccgtggttac
ctatctccttactttattaacagcccagaaaaaggtactgttgaactagataacccattt
attctacttgtagataaaaaaatatctaacattcgcgaattattaccaacattagaagca
gttgctaaagcaagcaagccactactaatcatcgcagaagaccttgaaggcgaagcatta
gctacattagtagttaataacatgcgcggtattgttaaagtatcagcagtgaaagctcct
ggttttggcgaccgtcgtaaagcaatgctacaagatatcgctgtattaactggcggtact
gtgatttcagaagaaatcggccttgagcttgaaaaagcaacagttgaagacctaggtaca
gctaagcgcgtaattatcactaaagatgatacaactatcattgatggtgctggcgaagaa
gcaggtattaacggccgtgtttcacaaattaaagcacaaatcgaagaagcaacatcagac
tacgataaagaaaaactacaagagcgcatggctaaactagctggcggtgttgcagtaatc
aaagttggtgctgcgactgaaatggaaatgaaagagaaaaaagaccgcgttgaagatgca
ttaaatgcaactcgtgcagcggttgaagaaggcgtagtacctggcggcggcgttgcacta
gttcgtgcagcaagtaagcttgtagatttagttggcgacaacgaagatcaaaatcacggc
attaaggttgcacttcgtgcaatggaagcgccacttcgtcaaatcgtaacaaacgcaggt
gacgaagcttcagttgtaattaacgcagttaaagcaggttcaggtaactttggttacaat
gctgctactggcgaatacaatgacatgattgaaatgggtatcctagatccaactaaagta
acacgctctgcactacaatttgcagggtctattgcgggtctaatgatcactaccgaagct
atggtagctgaaatccctaaagatgatagcgctcctgatatgggtggcatgggcggtatg
ggtggaatgggcggtatgatgtaa
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