Pseudoalteromonas nigrifaciens: PNIG_a0489
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Entry
PNIG_a0489 CDS
T05271
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00010
Glycolysis / Gluconeogenesis
png00020
Citrate cycle (TCA cycle)
png00260
Glycine, serine and threonine metabolism
png00280
Valine, leucine and isoleucine degradation
png00310
Lysine degradation
png00380
Tryptophan metabolism
png00620
Pyruvate metabolism
png00630
Glyoxylate and dicarboxylate metabolism
png00640
Propanoate metabolism
png00670
One carbon pool by folate
png00785
Lipoic acid metabolism
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
png01120
Microbial metabolism in diverse environments
png01200
Carbon metabolism
png01210
2-Oxocarboxylic acid metabolism
png01240
Biosynthesis of cofactors
Module
png_M00009
Citrate cycle (TCA cycle, Krebs cycle)
png_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
png_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
png_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
png_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
PNIG_a0489 (pdhD)
00020 Citrate cycle (TCA cycle)
PNIG_a0489 (pdhD)
00620 Pyruvate metabolism
PNIG_a0489 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
PNIG_a0489 (pdhD)
00640 Propanoate metabolism
PNIG_a0489 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PNIG_a0489 (pdhD)
00280 Valine, leucine and isoleucine degradation
PNIG_a0489 (pdhD)
00310 Lysine degradation
PNIG_a0489 (pdhD)
00380 Tryptophan metabolism
PNIG_a0489 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PNIG_a0489 (pdhD)
00670 One carbon pool by folate
PNIG_a0489 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
png04147
]
PNIG_a0489 (pdhD)
Enzymes [BR:
png01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
PNIG_a0489 (pdhD)
Exosome [BR:
png04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
PNIG_a0489 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
NAD_binding_8
GIDA
HI0933_like
AlaDh_PNT_C
FAD_binding_2
Pyr_redox_3
Thi4
DAO
FAD_binding_3
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
ASM52800
UniProt:
A0AAC9UDP6
LinkDB
All DBs
Position
I:479852..481279
Genome browser
AA seq
475 aa
AA seq
DB search
MSNELKTQVVVLGGGPGGYSAAFRAADLGLEVTLVESRDTLGGVCLNVGCIPSKALLHVA
KVIDDAAAMADHGVTFGAPQIDLDKIRSWKDSVIGQLTGGLTSMSKMRKVKVVYGYGKFT
GSNTIAVEGADGTTTITFDNAIIAAGSKPVSLPFIPEDDRVIDSTGALELKDIPEKLLVL
GGGIIGLEMGTVYRALGSAIDVVEFADQLVPAADKDIVKIYQKYVSDKFNVMLSTKVTGI
DAKDDGLYVTFEGKNAPAEPVRYDKVLVAVGRTPNGKLLDADKAGVNVDDRGFINVDKQL
KTNVEHIFAVGDIVGQPMLAHKAVHEAHVAAEVISGQKHYFDPKCIPSIAYTDPEMAWVG
VTEKEAKEQGLSIETAVFPWAASGRAIASARTEGSTKLIFDKESGRVIGGAMVGINAGEM
LGEIGLAVEMGADGEDLALTIHAHPTLNESIGLAAEIYEGSITDLPNKKAVKKKK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaattaaaaactcaagttgttgtactaggcggtggtcctggtggttactct
gcggctttccgtgctgctgacttgggcttagaagttacactagttgagtctcgcgataca
ctaggcggtgtatgtctaaatgtgggttgtatcccttcaaaagcgcttttacatgtagct
aaagtaattgatgacgcagcggcaatggccgatcatggcgttacttttggcgcaccacaa
attgacttagacaaaatccgttcatggaaagactctgttattggccaacttactggtggc
ttaactagcatgtcgaaaatgcgtaaagttaaagttgtatacggttacggtaaatttact
ggcagcaacaccattgctgttgaaggcgccgacggtacaacaacaattaccttcgataac
gcaattattgctgcaggttctaaaccagttagcttacctttcatcccagaagatgatcgc
gtaattgactcaactggcgcactagagcttaaagatatccctgaaaagctacttgtactt
ggtggtggtattattggccttgaaatgggcacagtataccgtgcactaggctcagcaatc
gacgtagttgaatttgctgatcaactagtaccagctgctgataaagacattgttaaaatt
taccaaaagtacgtaagcgacaaatttaatgtaatgctttctactaaagtaacgggcatt
gacgcaaaagacgatggcctatatgtaacgtttgaaggtaaaaacgcaccagcagaacca
gtacgttacgacaaagtacttgtagcagttggccgtacaccaaacggtaagttacttgat
gcagataaagcaggcgttaacgttgatgatcgcggctttattaatgttgataagcagctt
aaaactaacgttgagcacatttttgcagtgggcgacattgttggtcagcctatgcttgcg
cataaagcggttcacgaagcacacgttgcagctgaagttatttctggtcaaaaacattac
tttgatcctaaatgtattccttcaattgcctacacagatccagaaatggcgtgggttggt
gtaactgaaaaagaagcaaaagagcaaggccttagcattgaaactgcggtattcccgtgg
gctgcatcaggtcgtgcaattgcatctgcacgtactgaaggttctactaagcttattttt
gataaagaaagtggccgtgtaatcggtggcgctatggttggtattaacgcaggcgaaatg
ctgggcgaaattggcctagcagtagaaatgggcgcagatggcgaagacttagcacttacc
attcatgctcacccaacattgaacgaatcaattggcttagcagctgaaatttacgaaggt
tcaatcactgacttaccaaataaaaaagcagttaaaaagaaaaagtaa
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