KEGG   Pseudoalteromonas nigrifaciens: PNIG_a0489
Entry
PNIG_a0489        CDS       T05271                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
png  Pseudoalteromonas nigrifaciens
Pathway
png00010  Glycolysis / Gluconeogenesis
png00020  Citrate cycle (TCA cycle)
png00260  Glycine, serine and threonine metabolism
png00280  Valine, leucine and isoleucine degradation
png00310  Lysine degradation
png00380  Tryptophan metabolism
png00620  Pyruvate metabolism
png00630  Glyoxylate and dicarboxylate metabolism
png00640  Propanoate metabolism
png00670  One carbon pool by folate
png00785  Lipoic acid metabolism
png01100  Metabolic pathways
png01110  Biosynthesis of secondary metabolites
png01120  Microbial metabolism in diverse environments
png01200  Carbon metabolism
png01210  2-Oxocarboxylic acid metabolism
png01240  Biosynthesis of cofactors
Module
png_M00009  Citrate cycle (TCA cycle, Krebs cycle)
png_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
png_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
png_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
png_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:png00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PNIG_a0489 (pdhD)
   00020 Citrate cycle (TCA cycle)
    PNIG_a0489 (pdhD)
   00620 Pyruvate metabolism
    PNIG_a0489 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    PNIG_a0489 (pdhD)
   00640 Propanoate metabolism
    PNIG_a0489 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PNIG_a0489 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    PNIG_a0489 (pdhD)
   00310 Lysine degradation
    PNIG_a0489 (pdhD)
   00380 Tryptophan metabolism
    PNIG_a0489 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PNIG_a0489 (pdhD)
   00670 One carbon pool by folate
    PNIG_a0489 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:png04147]
    PNIG_a0489 (pdhD)
Enzymes [BR:png01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PNIG_a0489 (pdhD)
Exosome [BR:png04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PNIG_a0489 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored NAD_binding_8 GIDA HI0933_like AlaDh_PNT_C FAD_binding_2 Pyr_redox_3 Thi4 DAO FAD_binding_3 Trp_halogenase
Other DBs
NCBI-ProteinID: ASM52800
UniProt: A0AAC9UDP6
LinkDB
Position
I:479852..481279
AA seq 475 aa
MSNELKTQVVVLGGGPGGYSAAFRAADLGLEVTLVESRDTLGGVCLNVGCIPSKALLHVA
KVIDDAAAMADHGVTFGAPQIDLDKIRSWKDSVIGQLTGGLTSMSKMRKVKVVYGYGKFT
GSNTIAVEGADGTTTITFDNAIIAAGSKPVSLPFIPEDDRVIDSTGALELKDIPEKLLVL
GGGIIGLEMGTVYRALGSAIDVVEFADQLVPAADKDIVKIYQKYVSDKFNVMLSTKVTGI
DAKDDGLYVTFEGKNAPAEPVRYDKVLVAVGRTPNGKLLDADKAGVNVDDRGFINVDKQL
KTNVEHIFAVGDIVGQPMLAHKAVHEAHVAAEVISGQKHYFDPKCIPSIAYTDPEMAWVG
VTEKEAKEQGLSIETAVFPWAASGRAIASARTEGSTKLIFDKESGRVIGGAMVGINAGEM
LGEIGLAVEMGADGEDLALTIHAHPTLNESIGLAAEIYEGSITDLPNKKAVKKKK
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcaacgaattaaaaactcaagttgttgtactaggcggtggtcctggtggttactct
gcggctttccgtgctgctgacttgggcttagaagttacactagttgagtctcgcgataca
ctaggcggtgtatgtctaaatgtgggttgtatcccttcaaaagcgcttttacatgtagct
aaagtaattgatgacgcagcggcaatggccgatcatggcgttacttttggcgcaccacaa
attgacttagacaaaatccgttcatggaaagactctgttattggccaacttactggtggc
ttaactagcatgtcgaaaatgcgtaaagttaaagttgtatacggttacggtaaatttact
ggcagcaacaccattgctgttgaaggcgccgacggtacaacaacaattaccttcgataac
gcaattattgctgcaggttctaaaccagttagcttacctttcatcccagaagatgatcgc
gtaattgactcaactggcgcactagagcttaaagatatccctgaaaagctacttgtactt
ggtggtggtattattggccttgaaatgggcacagtataccgtgcactaggctcagcaatc
gacgtagttgaatttgctgatcaactagtaccagctgctgataaagacattgttaaaatt
taccaaaagtacgtaagcgacaaatttaatgtaatgctttctactaaagtaacgggcatt
gacgcaaaagacgatggcctatatgtaacgtttgaaggtaaaaacgcaccagcagaacca
gtacgttacgacaaagtacttgtagcagttggccgtacaccaaacggtaagttacttgat
gcagataaagcaggcgttaacgttgatgatcgcggctttattaatgttgataagcagctt
aaaactaacgttgagcacatttttgcagtgggcgacattgttggtcagcctatgcttgcg
cataaagcggttcacgaagcacacgttgcagctgaagttatttctggtcaaaaacattac
tttgatcctaaatgtattccttcaattgcctacacagatccagaaatggcgtgggttggt
gtaactgaaaaagaagcaaaagagcaaggccttagcattgaaactgcggtattcccgtgg
gctgcatcaggtcgtgcaattgcatctgcacgtactgaaggttctactaagcttattttt
gataaagaaagtggccgtgtaatcggtggcgctatggttggtattaacgcaggcgaaatg
ctgggcgaaattggcctagcagtagaaatgggcgcagatggcgaagacttagcacttacc
attcatgctcacccaacattgaacgaatcaattggcttagcagctgaaatttacgaaggt
tcaatcactgacttaccaaataaaaaagcagttaaaaagaaaaagtaa

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