Pseudoalteromonas nigrifaciens: PNIG_a0723
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Entry
PNIG_a0723 CDS
T05271
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PNIG_a0723 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
png03019
]
PNIG_a0723 (pcnB)
Enzymes [BR:
png01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PNIG_a0723 (pcnB)
Messenger RNA biogenesis [BR:
png03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PNIG_a0723 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ASM53002
UniProt:
A0AAC9UHF3
LinkDB
All DBs
Position
I:complement(700086..701384)
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AA seq
432 aa
AA seq
DB search
MISRGEHGISRKQFSPNAIKVLYRLKDGGFDAYLVGGCIRDVLLGQQPKDFDVVTNATPE
QVKKLFRNCRLIGRRFRLAHIVFGREIIEVATMRGHHEAPEDKNQISQSSEQGQLLRDNV
FGSIEEDAERRDFSINALYYSINDFCIYDYANGLAAIKAKQIELIGDPETRYREDPVRML
RAVRFATKLDMKIAPNSEKPMTALASLLDNIPPARLFEEILKLFLNGKAQANYLMLRKYG
LFNSLFPELNRILDNNPGGLEATFIENMFKNTDDRINADKKVTPAYVFAALLWFPLLERT
KTVQNEEQLSEYDAFSQAINSVLSDNAQHIAVPKRFTLGARDIWHIQHRLDKRAGQRAYR
LTQQPRFKAAYDFLLMRVEAGETQHSELAQWWTQYLSLDINGQKEMVRTLGQPAGPKPRR
RARRRTPKKPTE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
gtgatctcacgaggtgaacatggtatttctcgtaaacaatttagcccaaatgcaatcaaa
gttttataccgtttaaaagacggtggttttgacgcctacctagttggtggttgtattcgc
gatgtattgttaggtcaacagccaaaagattttgacgtggtaacaaatgccacgccagaa
caagttaaaaagttatttagaaactgtcgtttaattggccgccgctttcgtttagctcac
attgtatttggtcgtgaaataatagaagtagctaccatgcgcgggcaccacgaagcgcca
gaggacaaaaaccaaataagccaatcgagtgagcaaggacaattgctacgcgacaacgta
tttggcagtattgaggaagacgcagaacgccgtgacttttcaatcaatgcactttattac
tcaattaacgatttttgtatttacgattacgccaatggtttagccgcaataaaagctaaa
caaattgagctaattggcgatccagaaacgcgttaccgtgaagatccggtgcgcatgcta
cgtgcggtacgctttgccactaagctagatatgaaaattgcaccaaacagcgaaaagccg
atgactgctttagcaagtttgctagataacataccaccagcgcgtttgtttgaagaaata
ctcaaactgtttttaaacggcaaagcacaagctaactacttaatgctgcgcaaatacggc
ctatttaactcactgtttccagagctaaaccgtattttagataataatcctggcgggctt
gaagccacttttattgaaaacatgtttaaaaatacagacgatcgtattaacgcagataaa
aaagtaacccctgcgtatgtatttgctgcgctactttggtttccgctattagagcgcacc
aaaacagtacaaaatgaagagcagctctctgaatacgatgcattttcgcaagcaattaat
agtgtacttagcgataacgcccagcacatagctgttcctaaacgctttactttaggcgca
cgcgacatttggcatatacagcatcgtttagataaacgtgccggccaacgtgcatacaga
ttaacgcagcaacctcgctttaaagccgcatacgactttttattaatgcgtgtagaggca
ggcgaaacacaacatagcgagcttgctcagtggtggacacaatatttgagcctagatatt
aatggccaaaaagaaatggtaagaaccttgggtcagcctgcggggccaaaaccacgcaga
cgcgctcgccgccgcacacctaaaaagccaacagagtaa
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