Pseudoalteromonas nigrifaciens: PNIG_a0777
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Entry
PNIG_a0777 CDS
T05271
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PNIG_a0777 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a0777 (xseA)
Enzymes [BR:
png01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
PNIG_a0777 (xseA)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
PNIG_a0777 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
ASM53045
UniProt:
A0AAC9XWG9
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All DBs
Position
I:complement(739280..740581)
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AA seq
433 aa
AA seq
DB search
MSRLNREIRALLEQGFASLVLTGEISNFITPASGHWYFSLKDDKAQIKAAMWRGNNRNQS
YRPINGAQVTVKARVSLYEPRGDYQLIVEHMEPAGEGQLKQEFDALKMRLAAEGLFSSVY
KKPLPQNINRIGVITSATGAAIKDILTVLKRRAPQLEVIIYPAMVQGKDAHLQLIKQIEL
ANIRSEVDVLILGRGGGSLEDLWCFNHEQLARAIFNSQLPIVSAVGHEIDTTISDYVADV
RAATPSAAAELVSPNTQELHNKVTQLVNRLANAFKHDMSEKRAQALQLQHRLNLCHPRNQ
LNQKAQRLDELSIALQQAMRNSLYQQERTLNNLTPRLMRQSPDKKLTQASHQLAQLQTRL
NQAIQQQLQQANNSLALQASRLDSVSPLNVLARGYSITKTDKQKVVKSVADVKVGDTLIT
ELVDGTLHSQVLS
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacgccttaatagagaaatacgcgccctactcgagcaaggctttgcctcgctggta
ctaactggcgaaatttcgaactttattactccggcgtctgggcattggtatttttcgtta
aaagacgataaagcacaaataaaagcagccatgtggcgcggcaataatcgtaaccaaagt
taccgacccattaacggtgcgcaggtaacggtaaaagcgcgcgtttcactttatgaacca
cgcggcgactatcaacttattgttgagcatatggaacctgctggcgaaggacaacttaag
caagagtttgacgccctaaaaatgcgtttagccgctgaggggctatttagctcggtttat
aaaaaacctctaccgcaaaacattaaccgtatcggggtaataacctctgcaactggcgcg
gccataaaagatattttaaccgtactaaaacgccgcgcaccgcagttagaagttattatt
taccctgctatggtgcaaggtaaagacgcacatctgcagttaattaaacaaatagagttg
gctaatattcgcagcgaagtagacgtgcttattttagggcgtggtggcggctctttagaa
gatttatggtgttttaaccatgagcaacttgcacgcgctatatttaatagccaactgcct
attgtgagcgcggtaggccacgaaatcgacaccactattagcgactatgtagccgacgta
cgtgcagctacgccttctgcggcggcagagctggtaagccctaatacgcaagagttacat
aataaagtaactcagctagttaaccgtcttgctaatgcgtttaaacacgatatgagcgaa
aagcgcgctcaagcattacaactacagcacaggttaaatttatgccatccgcgtaatcag
ttaaatcaaaaagcgcagcgcttggatgagctaagcattgcactacaacaagctatgcgt
aatagtttatatcaacaagagcgcacccttaataatttaacgcctagattaatgcgccaa
tcacccgacaaaaagctcactcaagcaagtcaccaactcgcacaattacaaactcggctt
aaccaagcaatacagcagcaattacagcaagctaataacagcttagcactgcaggcaagt
cgcctagattcggtaagtccacttaatgtattagcgcgaggctatagtattacaaaaaca
gataagcaaaaggtggttaaatcggtagcggatgtaaaagtcggagatactttaattact
gaactggttgacggcacgttacactcgcaagtactaagttag
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