Pseudoalteromonas nigrifaciens: PNIG_a0894
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Entry
PNIG_a0894 CDS
T05271
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil1939-C5)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
png03009
]
PNIG_a0894 (rumA)
Enzymes [BR:
png01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PNIG_a0894 (rumA)
Ribosome biogenesis [BR:
png03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PNIG_a0894 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_23
Cons_hypoth95
FtsJ
PrmA
PCMT
Methyltransf_11
N6_N4_Mtase
Methyltransf_4
RrnaAD
DOT1
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
ASM53138
UniProt:
A0AAC9UGD2
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All DBs
Position
I:832294..833619
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AA seq
441 aa
AA seq
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MAQIFKATKKPLKQQSLVLDITAMDHHGRGIAKHNNKVCFVSNALPNEQVKATIVADKAR
YSEAQTHKVLQASEYRVAPFCEHYNQCGGCQLQHLDSSQQVVEKQIAVSKLFEKFAKLDE
LNWQAPLLSKATHYRRSARLAVMFDKKAKKMHVGYRASGSKSIISINECPVLSEVFANVF
TVFDNLINQHKALHSVSHLQLCQGDEQNFVIIRHTKPISEDIKALVAQSAAEQQWQLVWQ
SESEVIEHSHLAMPFYALEELGLKFEFGLNNFIQVNASVNQAMLKQAQNWLALKGDENVL
DLFCGIGNFSLVLAKQAKTVIGVEGVASAVAMATQNAHTNSITNAQFNCFDLTNKIETAS
WFNKNLDVLVLDPSRTGAITVLEQLPLKQFKTILYVSCDPVTLARDSAIISQAGFELHKI
GLMNMFPHTGHIETMALFQRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaatatttaaagcaacaaaaaaaccgctaaaacaacagtctttagtgctcgat
atcaccgccatggatcaccatggtcgcggcatagcgaaacacaataataaagtgtgcttt
gtaagtaatgctttgccaaacgagcaagtaaaagccaccattgttgccgacaaagcgcgt
tacagcgaagcgcaaacacataaagtattacaggcgagtgaatatcgcgtagcgccgttt
tgtgagcattataatcaatgtggtggttgtcagttacagcatttagatagcagccaacag
gtagtcgaaaagcaaatagcagtgagcaaattatttgaaaagtttgccaagcttgatgaa
ttaaactggcaagcacccttattaagtaaagccactcattaccgacgaagtgctcgttta
gcggtaatgtttgataaaaaagcaaaaaaaatgcatgtaggctatagagcaagtggctct
aaaagtattattagtattaatgagtgcccagtactaagtgaagtatttgcaaatgtattt
actgtatttgataacttaattaatcaacacaaggcattgcacagtgtatctcacttgcaa
ttgtgccaaggcgatgagcaaaactttgttattattcgccacacaaaacctatttcagag
gatataaaagcactggtagcacaaagtgccgctgagcaacaatggcaattagtgtggcaa
agcgaaagtgaagtgattgaacactcacatttagccatgccattttatgcacttgaagag
ttagggttaaagtttgaatttggcttaaataactttatccaagttaatgctagcgttaat
caagcaatgcttaaacaagcacaaaattggctggcactaaaaggcgacgaaaacgtatta
gatttattttgtggtattggtaacttttcactagtgctggcaaaacaagcaaaaacagta
attggtgtagaaggggttgcttcagcggttgcaatggcaacgcaaaatgcgcacactaac
tcaatcactaatgctcaatttaattgctttgatttaacaaataaaattgaaacggcttcg
tggtttaataaaaatttagatgtactggtgttagacccctcacgtactggggcgataacg
gtattagaacaacttcctttaaagcagtttaaaactattttatacgtctcatgcgaccct
gttactttagcccgtgacagcgctattatttcgcaagcaggctttgaactgcataaaatt
gggctaatgaatatgtttccgcacaccggacatattgaaactatggcgttatttcaacgg
aggtaa
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