Pseudoalteromonas nigrifaciens: PNIG_a1886
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Entry
PNIG_a1886 CDS
T05271
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
png03032
]
PNIG_a1886 (gyrA)
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a1886 (gyrA)
Enzymes [BR:
png01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PNIG_a1886 (gyrA)
DNA replication proteins [BR:
png03032
]
Prokaryotic type
DNA Topoisomerases
PNIG_a1886 (gyrA)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PNIG_a1886 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ASM53976
UniProt:
A0AAC9UI06
LinkDB
All DBs
Position
I:1674965..1677664
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AA seq
899 aa
AA seq
DB search
MTDLAHGILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTRVPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLALIQNPELSILELMDYIPGPDFPTAAIINGKKGIEQAYLTGRGKV
YMRARAEIEVDEKTHRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYAQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE
VVTRRTVFDLRKARDRAHMLEGLAIALANIDPIIELIRNSPTPAEAKVALTARSWELGNV
KAMLDKAGEDNVARPDWLAAELGIRDGQYFISEQQAQAILDLRLHKLTGLEHEKILTEYQ
SLLDLIAELLHILATPERLMEVIRDELVEIKAQYGDERRTEINAAAHDISLEDLITEENV
VVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEADERITAILPVREYAEDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDVTDGSNEIMLFTDAGKVVRFKEAEETTVVDENG
NPVLDEEGNPEIRFKGVRPMGRTATGVRGIKMPEGQRVVSLIVPKTDGAILTVTENGYGK
RTLLEDYPAKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVTESDLIDIEDVETVDTVIDEVADDNPPSE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgcccatggcattctgccagtcaatattgaagacgagttaaaaaactcc
tacttagattacgcaatgagcgtaattgtaggacgtgcattaccagacgtgcgtgatggc
ttaaaacctgttcaccgccgcgttttgtttgcaatgaacgagcttagtaatgattggaac
aagccttacaaaaaatcggcacgtgttgtcggtgacgtaatcggtaaataccacccacac
ggcgatagtgctgtttacgacactatagtacgtatggcacagccattctcactgcgttat
atgctagtagatggtcaaggtaacttcggttcggttgatggtgattcagcagcggcaatg
cgttatacagaagtacgtatggcaaaaatgtcgcatgaattattagccgatcttgaaaaa
gaaacggttgatttcgttcctaactacgacggcactgagcaaatccctgacgttttacca
accagagttcctaacttattagtaaacggttcatcgggtattgcggtaggtatggcaaca
aacattccacctcataacttaactgaagtggtaaatggctgtttagcactcattcaaaac
cctgaattatctattttagagttaatggattatatcccgggcccagatttcccaacggct
gcaattatcaacggtaaaaaaggcatagagcaagcctatttaactggccgtggtaaagtg
tacatgcgtgcccgcgctgaaatagaagtagatgaaaaaacgcatcgtgaaactatcatt
gttcacgaaataccttatcaagttaacaaagcgcgcctaattgaaaaaattgctgagctg
gttaaagataaaaaaattgaaggtattagtgcgctacgtgatgaatcagataaagacggt
atgcgtatcgttattgagattaaacgtggtgacgtaggcgaagttattttaaataattta
tatgcgcaaacgcagttacaaactgtgtttggtatgaatatggttgcgttaattaacaac
cagcctaagtgctttaatttaaaagaaatgcttgaagagtttattattcaccgccgtgaa
gtagtaactcgtcgtactgtttttgatttacgcaaagcgcgtgaccgtgcgcatatgcta
gaaggtttagcaattgcactggcaaacatcgacccaattattgagcttattcgtaattca
ccaacacctgctgaagcaaaagttgctttaacagcgcgttcgtgggaattaggtaacgta
aaagccatgcttgataaagcaggcgaagacaacgttgcccgcccagattggttagctgct
gagttaggtattcgcgatggtcaatactttatttctgagcaacaagctcaagcaatccta
gatttacgcttacataagctaacgggtttagaacacgaaaagattctaactgaataccaa
tcgttattagatttaattgctgagcttttacatattttggcaacaccagagcgtttaatg
gaagttattcgcgatgagttagttgaaattaaagcgcaatatggtgatgagcgtcgtact
gaaataaatgccgcagcacacgatatcagccttgaagatttaattaccgaagaaaacgta
gtagtaacgctttctcacgaaggttatgttaagtatcaggctctgtctgattacgaagcg
cagcgtcgtggtggtaaaggtaaatcggcaacgaagatgaaagatgaagatttcattgaa
cgtttattagttgctaatacgcacgatactatattgtgtttctcaacggctggtcgttta
tattggcttaaagtgtatcagttaccacttgcaagtcgtgcagcgcgcggcaaaccaatt
gttaacttattaccacttgaggcagatgaacgtattaccgctatattaccagtacgcgag
tatgcagaagataaatacatctttatggcaaccgcatttggtacagtgaagaaaacacca
ctaacggcatacagtcgtcaacgtgcaagcggtattattgcggttaacctaaatgaaggc
gatagcctaattggtgttgatgttaccgatggcagcaacgaaattatgttgtttaccgat
gcgggtaaagtagtacgctttaaagaagcagaagaaacaacggttgttgatgaaaacggt
aacccagtactagacgaagaaggtaaccctgagattcgcttcaaaggtgttcgtcctatg
ggccgtacagctacaggtgttcgtggtattaaaatgcctgaaggacaacgcgtagtatcg
ttaattgtgcctaaaacagatggtgctattttaaccgtgactgaaaacggctacggtaaa
cgtactttacttgaagactacccagcgaagagtcgtgcgactcaaggtgtagtgtctatt
aaagtaagtgagcgtaatggtgcggttgtaggtgctgtacaagttgacgataacgatgaa
ataatgattatttcaaatcgtggtaccttagtacgaactcgtgttaatgaagtttctacg
gttggacgtaatacgcaaggtgttattttgatcagaactattgacgaagagcaagtagtt
ggtttacaacgtatagaagagattgaagttaccgaaagtgacttaattgatatcgaagac
gtcgaaacagttgatacggttattgatgaagtagcggatgataatcctccttcagaataa
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