Pseudoalteromonas nigrifaciens: PNIG_a2158
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Entry
PNIG_a2158 CDS
T05271
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00020
Citrate cycle (TCA cycle)
png00190
Oxidative phosphorylation
png00650
Butanoate metabolism
png00720
Other carbon fixation pathways
png01100
Metabolic pathways
png01110
Biosynthesis of secondary metabolites
png01120
Microbial metabolism in diverse environments
png01200
Carbon metabolism
Module
png_M00009
Citrate cycle (TCA cycle, Krebs cycle)
png_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
png_M00149
Succinate dehydrogenase, prokaryotes
png_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PNIG_a2158 (sdhA)
00650 Butanoate metabolism
PNIG_a2158 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PNIG_a2158 (sdhA)
00720 Other carbon fixation pathways
PNIG_a2158 (sdhA)
Enzymes [BR:
png01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PNIG_a2158 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
DAO
GIDA
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
ASM54209
UniProt:
A0AAC9UI91
LinkDB
All DBs
Position
I:complement(1904121..1905893)
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AA seq
590 aa
AA seq
DB search
MKYSVREFDAVVIGAGGAGMRAALAITESGKTCALISKVFPTRSHTVSAQGGITVALGNS
HEDNWEWHMYDTVKGSDFIGDQDAIEYMCQTGPEAITELENMGLPFSRFENGRVYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHLLYQQNVKNKTNVFSEWYALDLVKNDNGDVVGC
TAIEIETGEITYFKSKAVVLATGGAGRIFASTTNAHINTGDGVGMATRAGISMQDMEMWQ
FHPTGIAGAGTLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGCDGPWGPHLKLKLDHLGAETLNLRLPGVCDLAKTFAHVDPAKEPIPVIPTCHYMMGGV
PTNVNGQALQIDANGKETIVEGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGNFLG
KYLNDVEISKAASESDLETSLARYNRWENSTAGQGEDPVQIKKDLQQCMQLNFSVFREGD
SMAAGLQELKEIRERLQHARLDDKSSDFNTQRIECLELDNLMETAYSTAVAANFRTESRG
AHSRFDFPDRDDENWLCHSVFNPLTDEMSKRDVNYAPKSREAFPPKARVY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatattctgttcgtgaatttgacgccgtagtaatcggtgccggtggtgcaggtatg
cgcgctgctttagctattactgagtctggcaaaacgtgtgctttaatctctaaagtattt
ccaactcgctcacacactgtatcagcacagggtggtattacagtagcgcttggtaactcg
cacgaagataactgggaatggcacatgtacgataccgttaagggctccgattttatcggt
gaccaagacgctattgaatatatgtgtcaaacaggcccagaagctattactgaattagaa
aacatgggtctcccattttctcgctttgaaaatggccgtgtttaccaacgtcctttcggt
ggtcaatcgaaaaactttggtggtgaacaagctgcacgtactgcggcagctgccgatcgt
actggtcacgcactattacaccttctttatcaacaaaatgttaaaaacaaaacaaatgta
ttctcagaatggtatgcacttgatttagttaaaaacgataatggtgatgtagtaggttgt
actgcaattgaaattgaaacaggtgaaatcacttatttcaaatctaaagcagtagtatta
gcaacaggtggtgcgggtcgtatttttgcatcaactactaatgcgcacatcaacaccggc
gatggcgttggtatggcaacacgtgctggtatttctatgcaagatatggaaatgtggcag
ttccacccaacgggtattgctggcgcgggtacgctagtaactgaaggttgtcgtggcgaa
ggtggttatcttttaaataaagatggcgagcgcttcatggaacgttatgcaccaaacgca
aaagacttagcgtctcgcgatgtggttgcacgttcaatgatgactgagatccgtgaaggt
cgtggttgtgatggtccttggggtcctcaccttaagctaaaactagatcacttaggtgca
gaaacactaaatctgcgtcttcctggtgtatgtgaccttgctaaaacatttgctcacgtt
gaccctgcaaaagaaccaattccagtaattcctacatgtcattacatgatgggtggcgtg
ccaaccaacgtaaatggtcaagcgctacaaatcgacgcaaacggcaaagaaacaatcgtt
gaaggtttgtttgcggtaggtgagattgcctgtgtatcagtacacggtgctaaccgctta
ggtggtaactcattacttgatttagtggtatttggtcgtgcggccggtaacttcttaggt
aaatacctaaatgatgttgaaatttctaaagcggcatcagagtctgatttagaaacatca
cttgcacgttacaatcgttgggaaaattcaacggctggccaaggtgaagatccagttcaa
atcaaaaaagacttacagcaatgtatgcaacttaacttctcggtatttcgtgaaggtgac
tcaatggctgctggtctgcaagaacttaaagaaattcgtgaacgtctgcaacatgcacgt
cttgatgataaatcatcagacttcaacacgcagcgtattgaatgtcttgaactagataac
ttaatggaaacagcttactcaactgcagtagctgcaaacttccgtaccgaaagccgtggt
gcacactctcgctttgacttcccagatcgtgatgacgaaaactggttatgtcactcagta
tttaatccgttaacggatgaaatgagcaagcgtgacgtaaactacgcgcctaagtcgcgt
gaagctttcccacctaaagcacgtgtgtactag
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