Pseudoalteromonas nigrifaciens: PNIG_a2167
Help
Entry
PNIG_a2167 CDS
T05271
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00541
Biosynthesis of various nucleotide sugars
png01100
Metabolic pathways
png01250
Biosynthesis of nucleotide sugars
Module
png_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PNIG_a2167 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
png01005
]
PNIG_a2167 (kdsB)
Enzymes [BR:
png01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
PNIG_a2167 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
png01005
]
Lipid A
PNIG_a2167 (kdsB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
NTP_transferase
Bflower_3
DUF2064
Motif
Other DBs
NCBI-ProteinID:
ASM54217
UniProt:
A0AAC9UK30
LinkDB
All DBs
Position
I:complement(1911604..1912365)
Genome browser
AA seq
253 aa
AA seq
DB search
MEFVVVIPARYASSRLPGKPLADICGKPMIQHVYEKACLSGASKVVIATDHQKVFDAVST
FTSDVLMTREDHQSGTERLAEVVDLLKLDNNTIVVNVQGDEPLLAPENVSQVATLLNEST
APMATLSVAIEEQEDVFNPNAVKVVSDINKNALYFSRASIPFDRSAMMGEQSTLDLTPFQ
RHVGIYAYRAGFIKQYIELSVSPLEQLESLEQLRVLYHGYNIKIEQAHITPQAGVDTPED
LAKVISYLQSKHA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtggaattcgtagttgttattcctgcgcgttacgcttctagccgtttaccaggcaaacca
ctagccgatatttgtggtaagccaatgatccagcatgtttacgaaaaagcctgtttatcg
ggtgcgagtaaagttgttattgcgaccgatcatcaaaaagtatttgatgctgtgagtacc
ttcacaagtgatgtattaatgacgcgtgaagatcatcagtcaggcacggaacgtttagca
gaggttgttgatttacttaagcttgataacaacactattgtagttaatgtgcaaggtgat
gagccattattggcaccagaaaatgtatctcaagttgccacgttattaaatgaatcaact
gcacctatggccactttaagtgtagcgatagaagagcaagaagacgtttttaatcctaat
gcagttaaagtcgttagcgatattaataaaaatgcattgtatttttcgcgtgccagtatt
ccgtttgatcgtagcgccatgatgggcgagcagagcacgctggatttaacgccgtttcaa
cgccatgtgggtatttatgcctaccgagctggttttattaagcaatatattgagctaagt
gtgtcgccgctagagcagctagaatcactagaacaattacgtgtgctttaccatggctac
aatattaaaatagagcaagcgcatattactccacaagcgggtgtcgatacgccagaagat
ttagctaaagtaattagctatttgcaaagtaaacacgcgtga
DBGET
integrated database retrieval system
