KEGG   Pseudoalteromonas nigrifaciens: PNIG_a2352
Entry
PNIG_a2352        CDS       T05271                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
png  Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:png00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:png02048]
    PNIG_a2352 (hsdR)
Enzymes [BR:png01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PNIG_a2352 (hsdR)
Prokaryotic defense system [BR:png02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PNIG_a2352 (hsdR)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 Helicase_C HSDR_N DUF4145 HSDR_N_2 nSTAND3 AAA_16 T1R_D3-like
Other DBs
NCBI-ProteinID: ASM54378
UniProt: A0AAC9XY66
LinkDB
Position
I:complement(2098619..2102062)
AA seq 1147 aa
MKQSMNFEHIQSKWPELHQLAAFAEDYAITDPQSSLVKLRCFAEKVVGYLYKELSLPVLP
TSNIFDKLTADDFTSAVPRLITDKLHAIRKSGNQAAHEGKVDQQQAIWILKESYFVASYL
FMAYANGTQQECPEFKAPEQTQPSNQSDAQFAKKNKQLTQQLAENQARLKRALDELEAAE
LAQKQAQQQTAKLKQTIDAEKLNQVKTRNEQIVNSSFNFNEDETRKRIIDLDLRNAGWNV
ALDDKSTEDVGKEVKVTDQPTTTGIGYVDYVLWDDDGKPLGVIEAKRTRENIEKGRQQAT
LYANALEKQYGQRPVIFYSNGWDIKILDDAQGYNSRGLYGYYSKDSLQYLIKQRTLKKEL
NTTPIDTAVAGRLYQMETITRVCERFSDKHRKALIVQATGTGKTRVSIALAKRLLDAGWA
KRVLFLCDRKELRKQAGNAFTEHTKEPVHIVGKSAKNTAASARVFIATYPGMLRIMNKYD
VGHFDLIVADESHRSIYNIYGDIFKYFDALEVGLTATPVEMVSRSTCDLFSCDYKMPTAN
YPLEDAIEQGNLVPYKIVSYTTQFLREGIKKDNLTDEQIAQLEEQGIDPNELDFDAKQID
EAIKNKDTNRLILRNLMEKGLRDKDGQLPGKTIIFARNIAHAELMAQLFSELYPQHGANF
CRVIHSKYERAEELIDDFKSSDENSVRIAVSVDMLDTGIDVPECVNLVFAKPIKSKVKFW
QMIGRGTRLCENLYGPGKHKTHFLIFDHWANFEYFDENPEEEDVKQAKSLLQKLFEARVT
LAQTALKKANMDVFDQTIKLIHDDICLLPMESISVRDNWQVVETFKDLKRLNQFIPDDVQ
TLLEEVAPLMQWRNIMGQSEAYKFDSELTTIQTLLITDESQIDLAKQNVMNKVESLQMHL
NEVRSKAPAIAEIQTEQYWQYLTHAALEQSRINLRSIIHLRNKDITPPKSDFILDIKEDA
NQIHEADRLTKIVSIDYQIYRQEVEKTLTPLFETDSVLQKIRNGEQVTEADLAQLSSLVH
TQNPSVDLNTLKEFFPESTASLDKILRTIVGMDKNAIEQSFTTFVQQIHTHVNAKQQRFI
GMLKNHLIRHGSIEIAQLYDAPFTQIHDMGLDGVFSQQQADVIEQFIKQFDVQLGDKNQS
VEKEVRL
NT seq 3444 nt   +upstreamnt  +downstreamnt
atgaagcagtcaatgaactttgaacatattcaatctaagtggccagagctacaccagtta
gccgcttttgcagaagactatgcgattaccgatccgcaaagctcattggttaagctgcgt
tgctttgccgaaaaagtagtaggctacttatacaaagagcttagcttacctgttttacca
acgtctaacattttcgataaactcaccgccgacgactttaccagtgccgtgccgcgttta
ataaccgataagctccatgccatacgtaaaagcggcaaccaagccgcgcatgaaggcaaa
gtagatcaacaacaagctatttggatattaaaagaaagctactttgtagcctcttatttg
tttatggcttatgccaatggcacgcaacaagaatgcccagagtttaaagcgcctgagcaa
acacaacctagcaatcaaagcgatgcccagtttgctaaaaagaacaagcaactcactcaa
caattagccgaaaatcaagcccgtttaaaacgcgcgcttgacgaactagaagccgcagag
cttgcacaaaaacaagcccagcagcaaacagcaaaactaaaacaaactattgatgcagaa
aagcttaaccaggttaaaacccgcaatgagcaaattgttaactcaagttttaactttaac
gaagatgaaacccgtaaacgcattatcgacttagacctgcgtaatgcaggttggaatgta
gcacttgacgacaaatcaacagaagacgttggcaaagaagtaaaagtaacagatcaacct
acaacaacaggcataggttatgttgattacgtattatgggatgacgatggcaagccactt
ggcgtaattgaggcaaaacgcacccgcgaaaatatcgaaaaaggccgccagcaagcaacg
ctttatgccaacgcgctcgaaaagcaatatggtcaacgccccgttattttttattcaaac
ggctgggatataaaaattcttgatgacgcgcaaggttataatagccgtggtttatacggt
tactactcaaaagattccctgcaatacctaataaagcaacgcacgcttaaaaaagagcta
aacaccacgccaatagataccgcagtagcagggcgtttgtatcaaatggaaaccataacc
cgtgtgtgtgagcgctttagtgataaacaccgcaaagcgcttattgtgcaagcaaccggc
acaggtaaaacacgcgtatctattgcccttgccaaacggctgctcgatgcaggttgggct
aagcgcgtactatttttatgtgatcgaaaagagctacgtaaacaagcgggtaatgccttt
actgaacacaccaaagagccagtacacattgtaggcaaaagcgctaaaaacaccgcagca
agtgcgcgtgtttttatagcaacctacccaggcatgctgcgtataatgaacaagtacgac
gtaggccactttgacctaatagtagccgatgaatcgcaccgttcaatttataatatttat
ggtgatatttttaaatactttgacgcgctagaagtgggcttaaccgccacgccggttgaa
atggtatcgcgctcaacctgtgacttgtttagctgtgattacaaaatgccaacagccaat
tacccacttgaagacgccatagaacaaggcaacttagtcccttacaaaattgtaagttac
accacacaatttttacgcgaaggcattaaaaaagataacctaaccgatgagcaaatagcc
caactagaagagcaagggattgatccgaacgagctcgactttgacgcaaaacaaatagac
gaagccattaaaaataaagacaccaacaggctaatactacgtaacttaatggaaaaaggc
ctgcgcgataaagacggtcagctaccaggtaaaactattatatttgcccgtaacatagct
cacgccgaattaatggcgcagttgtttagcgagctttacccgcagcatggtgctaatttt
tgccgcgttattcactcaaagtacgaacgcgctgaagagctaatagacgactttaaatca
agcgacgaaaacagcgtacgcatagccgtatcggtcgatatgctcgacaccggcatagac
gtaccagaatgtgtaaaccttgtatttgccaaacccataaaatcaaaagtaaagttttgg
caaatgattggccgtggcacacgcttatgcgaaaacctatatggccctggcaagcacaaa
actcactttttaatattcgaccactgggcaaattttgaatactttgatgaaaacccagaa
gaagaagacgtaaaacaagctaaatcgttactgcaaaagctatttgaagcgcgggtaacc
cttgcacaaaccgccctcaaaaaagccaatatggatgtgtttgatcaaacaataaaatta
attcacgacgatatttgcttactgccaatggaatcaatatcggtgcgcgacaactggcaa
gtggtcgaaacctttaaagacctaaaacgccttaatcagtttatccctgatgatgtacaa
acgttgctagaagaagtagcgccgcttatgcaatggcgtaacattatggggcaaagtgaa
gcgtataaatttgattctgagctaaccaccattcaaacgctgttaattaccgatgaaagc
caaattgatttagctaaacaaaatgtaatgaacaaagttgaatcgctacaaatgcactta
aacgaagtacgtagcaaagcacctgcaatagcagaaatacaaaccgagcaatattggcag
tatttaacccatgcagcgcttgagcaaagccgcattaatttacgcagtattatacacctg
cgtaataaagacataacaccgccaaaaagtgactttatactcgatataaaagaagacgca
aaccaaatacacgaagctgataggcttacaaaaatagtctctattgattatcaaatatac
cgacaagaggttgaaaaaacactcaccccgttatttgaaaccgacagcgttctgcaaaaa
attcgcaatggcgaacaagtaaccgaagccgacttagcgcaattaagctcgttagtgcat
acgcaaaacccaagtgttgatttaaatacattaaaagagttttttcccgaatcaaccgct
agcttagacaaaatattgcgtaccatagtcggcatggataaaaacgccatagagcaaagc
tttacaacctttgtgcagcaaatacacacccatgttaatgccaagcaacagcgctttatt
ggtatgttaaaaaaccacctaattcgccacggctctattgaaatagcccagctttacgac
gcaccttttacacaaatacacgacatggggctcgatggcgtatttagccagcaacaagcc
gacgtaatagagcaatttattaagcagtttgatgtacaattgggtgataaaaaccaatct
gttgaaaaagaggtgagattgtaa

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