Pseudoalteromonas nigrifaciens: PNIG_a2555
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Entry
PNIG_a2555 CDS
T05271
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a2555
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PNIG_a2555
Archaeal homologous recombinant proteins
PNIG_a2555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF349
Motif
Other DBs
NCBI-ProteinID:
ASM54562
UniProt:
A0AAC9UKS0
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Position
I:complement(2305979..2308660)
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AA seq
893 aa
AA seq
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MIFKHLFTPKWKHPKLQVRLDAIEKLDVQRDAIILSTLALEDSSAEIRRKALQKVNDLPL
WWKAYKQDQALKDIAEQQISTAVLSSESTLSPQIKSEYIERFAPVKTLEKLAFAEKELQV
RVKLLKRLGNPKLIEKAFKEGSEELQAQLVELVITHQLTKPLLKHAQNSAKTALNTHLEN
ERLAIEMPAQVGGETRVILAKLNALRDKNDFALVNPKAGELMAQWQALELKWLSTEQVKL
LNEKYSTITEKLNAHIAQLRSEHEKEQQLLALQQRQLLALATLEALSEEIENALQLGLET
PEQIQQDWLDAKVAQAQQAINETELANNPQSKQVINKLEKSFTQVAKLPELTSAIKDYKL
AFAALCEIKPAADLAQYDETLAAFNSGFKAARNHLNILDSALQGTFKTQLNAHKKQFLVP
MNELIKPLEKNQSQAKRKARDVKRLIEEGRFNVAFGVFKGFEELFNTLTEQYQQPLVSLK
TDLEAQLADAKDWQKYAAAPKREALLEEVSTLALEECVDPQQRADQVKVLRKRWNELGRL
DTDEEKQQGEQFDQKIELLFAPCRNYFAEQEVQREASKAQRESIIADMHALHLLATDEQG
FDWKQFESQYNRLNKAWRSVGKVDPKTYRVLNDRYKNEQQRVLAALNAFHKGNATLKNAL
VEQAQQLSQSDDLAAACQELKQLQQQWQAIGFAGLKAENALWQKFRQFNDETFTKRSSEF
EQQKLDQSENDKQVVAELNELELALGQINEKAQLHDLETKVKGYTQFKSLSPKVTSLLSA
IEEKLAGLTSKAEQANLVALFNALENNEAIPSQYQAALKTSLSSAQLLTRMEILANVSSN
DAMQRMAEQVAMLDDKHRGEHADISYYLKQLLALSEGSVDADTLARLKAVFTA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatctttaaacacctttttacgccaaaatggaaacacccaaagctgcaagtacgtcta
gacgcaatcgaaaaattagatgtacaacgcgacgcaataattttaagcactttagcgctg
gaagatagctcagcagaaattcgtcgtaaggcactgcaaaaagtaaacgacttgccactg
tggtggaaagcttataaacaagatcaagcattaaaagatattgctgaacaacaaatatct
accgctgttttaagtagcgaaagtacactgtcgccgcaaattaaaagcgaatatatagag
cgttttgcaccagtaaaaacccttgaaaaacttgcctttgcagaaaaagagttgcaagtg
cgggttaagttactaaagcgcctaggaaaccctaaactaatagaaaaagcctttaaagag
ggcagcgaagagttacaagcgcaactagttgagctggttattacccaccagttaactaaa
ccattattaaagcatgcacaaaacagtgctaaaacagcgcttaacacgcatttagaaaac
gagcgtttagcaattgaaatgccagcgcaagttgggggggaaacccgtgttattttagct
aagctaaatgcgctgcgcgataaaaatgattttgcattagtcaacccaaaagccggtgag
ttaatggcgcaatggcaagccttagagcttaaatggcttagcactgagcaagtaaaactg
ttaaacgaaaagtacagcacaattaccgaaaagctaaatgcccatattgcacagcttcgc
agtgagcacgaaaaagagcagcaattacttgcactacaacagcgtcaactgttggcatta
gcaacgcttgaagctttaagtgaagaaattgaaaatgcattacaacttggcctagaaacg
ccagagcaaattcagcaagattggcttgatgcaaaagtagcgcaggctcaacaagcaata
aatgaaacagagttagccaataacccgcaatcaaagcaggttattaataagttagaaaag
tcatttactcaagtagctaaattacctgagctaacgtctgctattaaagattataagctg
gcatttgctgcactgtgtgaaataaaaccagcagccgatttagcccaatacgacgaaacc
ctagctgcatttaatagtggttttaaagcagcgcgtaatcatctaaatatattagatagt
gcattgcaaggtacgtttaaaacacaacttaatgcgcataaaaagcaatttttagtgcca
atgaacgagttgataaaaccgcttgaaaaaaatcaaagccaagctaaacgcaaagcccgt
gatgtaaagcgcctaatagaagaaggtcgttttaacgttgcatttggtgtgtttaaaggc
tttgaagagttatttaataccttaactgagcagtatcagcaaccacttgtaagcttaaaa
accgatttagaagcgcagctagctgacgccaaagattggcaaaaatatgctgcagcacca
aagcgcgaagcattacttgaagaagttagcacgctcgctttagaggagtgcgtagatccc
cagcaacgggctgatcaagttaaagtgttgcgtaaacgttggaatgagcttggccgctta
gatacagacgaagaaaagcaacaaggtgagcaatttgatcaaaaaatcgaattattgttt
gcaccttgccgtaactattttgcagagcaagaagtacaacgtgaagcgtcaaaagcgcag
cgcgaaagtattattgctgacatgcatgcactgcacttactcgcaactgacgagcagggt
tttgattggaagcagtttgaaagccaatacaatcgtttaaacaaagcatggcgtagtgtg
ggtaaagttgaccctaaaacgtaccgtgtattaaacgatcgttacaaaaacgagcagcag
cgtgtgctagcggcgttaaatgcgtttcataaaggcaatgctacacttaaaaatgcatta
gtagagcaagcgcagcaattatcacaaagtgatgacctagcagcagcatgccaagagcta
aaacaattacagcagcagtggcaagcaattggctttgccggcttaaaagctgaaaatgcc
ttatggcaaaaatttcgtcaatttaacgacgaaacttttactaaacgcagtagcgagttt
gaacagcaaaagttagatcaaagcgaaaacgacaagcaagtagtcgctgagcttaacgaa
cttgaattggcgctgggtcaaattaacgaaaaagcgcaattacacgacttagaaactaaa
gttaaagggtatacccagtttaagtcactatcgccaaaagtaacgtcgttacttagcgcc
atagaagagaagcttgcagggctaacgagcaaagccgaacaagctaatttagtggcctta
tttaacgctcttgaaaataatgaagcgataccgagccagtaccaagctgcacttaaaaca
tcacttagtagcgcacagttacttactagaatggaaattttagctaatgtaagtagtaat
gatgcaatgcaaagaatggcagagcaagttgccatgttagatgataagcatcgtggcgaa
catgcagatataagctattatttaaagcagttgttagcgctcagtgaaggttcagttgat
gctgacacactagcacggctaaaggctgtttttacagcttag
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