Pseudoalteromonas nigrifaciens: PNIG_a2652
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Entry
PNIG_a2652 CDS
T05271
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03030
DNA replication
png03430
Mismatch repair
png03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PNIG_a2652 (dnaQ)
03430 Mismatch repair
PNIG_a2652 (dnaQ)
03440 Homologous recombination
PNIG_a2652 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
png03032
]
PNIG_a2652 (dnaQ)
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a2652 (dnaQ)
Enzymes [BR:
png01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PNIG_a2652 (dnaQ)
DNA replication proteins [BR:
png03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PNIG_a2652 (dnaQ)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PNIG_a2652 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
FAN1_HTH
VRR_NUC
Rv2179c-like
Sds3
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ASM54648
UniProt:
A0AAC9XYE8
LinkDB
All DBs
Position
I:complement(2410416..2412608)
Genome browser
AA seq
730 aa
AA seq
DB search
MLDTVFIYSHGNVMKKELPAKYYLAHFRELIEFVTSKCMHLLEPKHSEFINKINQLDEQS
QCMLARVYSRKPYLVQAQSLTYEEIISPHQAIYTLKKAGILFEPNEQHYSQLLAHLTKPA
LLELLSNYDEQISYKKSAAKGALVNSAREFFKSCPHELAPLYSQYVINNRSDYYEYFEFL
FAGKLSSGDVNHQNRFVMRDLGLTATREGHSESLSRFETKAEGQSNYLLNRYRLAFKNIT
DENDYVALAPQVLVQAAYGAIAVALKNKLLVQLFKQLKNTNSELAFSLLEGCVDDSEAHE
IQIREQYRLGNKQWVKARLEAIIENPLTDDLLYFADDFLMRKFNKQTRSRLSTMLADTQC
VLEIDELYRGEVEQGVNDYYTGQGMQVFNTENTLWQSLFGLVFWHELFIDTPYPLCNEFD
IYPQVLRLGNFYAAQPAQINERLAQCQTPQALLKLVCKNAAQYFDQPNGLFKWHNELLQP
LEALILNSPIEALIDHLTNMSKHYLQLKDGYPDLMVIHNGKVHFEEVKAPGDKLRRNQLT
TIDNLKSSGFEVHIAVVKWFIDPNRIYSVVDLETTGALKGGNKITEIGLVKVQHGKVIDT
WTTLVNPQRHIPGFITSLTGISDSMVSNAPVFADIVKPLMAKLAGSIFVAHNVNFDYGFI
KKECEMAKVPFKMPKLCTVVESRKAFAGLKSYSLGNLSKHFNLNLTSHHRALADATATAQ
LLLLIQKSQS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgctagatactgtttttatatacagccatggcaatgttatgaaaaaagaattaccagca
aaatactatttagcgcattttagagagcttattgagtttgtaacaagtaaatgtatgcac
ttacttgagcccaagcacagcgaatttattaataaaattaatcagcttgatgagcaaagc
cagtgtatgttggcgcgcgtgtattcgcgcaaaccctatttagtacaagcgcagtccctc
acttatgaagaaataatctcgccgcatcaggctatttatacgctaaaaaaagcaggtatt
ttatttgagccgaacgagcagcattattcacagcttttggcgcacttaaccaaacctgct
ttactagagttactaagtaattacgacgaacaaataagctataaaaagagcgccgctaaa
ggcgcgctggtgaatagtgcccgtgagttttttaaaagctgcccgcacgagcttgcaccg
ctttatagccagtatgtaattaataatcgcagcgattattatgagtattttgagttttta
tttgcaggtaaactaagcagtggtgatgtgaatcatcaaaaccgttttgtaatgcgagac
ttaggtttaaccgctacgcgtgaagggcatagcgagagcttatcgcgctttgaaacgaag
gccgaggggcaatcaaactatttattaaaccgttaccgattagcatttaaaaatataact
gatgagaacgattacgttgctttagcgccgcaggttctagtgcaagctgcgtatggtgca
atagctgttgcgcttaaaaataagttattagtacagctttttaaacagttaaaaaacacc
aatagcgaacttgcttttagtttacttgaagggtgtgttgatgatagcgaagcacacgaa
attcaaataagagagcaatacaggcttggtaataaacagtgggtaaaagcacgcttagaa
gccattattgaaaatccgctaacggatgatttactgtattttgctgacgactttttaatg
cgtaaatttaataagcaaacgcgttcgcgtttaagcactatgcttgctgacactcagtgc
gtactcgaaattgacgaattataccgaggtgaagtagagcaaggcgtaaacgattattac
actggccaaggtatgcaggtatttaataccgaaaacacattgtggcaaagtttgtttggt
ttagtattttggcacgaattatttattgataccccttatccgctatgcaatgagtttgat
atttatccgcaagtattaaggcttggtaatttttatgcagcgcaaccagcgcaaataaat
gagcgcttagcacagtgccaaacacctcaggcattacttaaattagtatgtaaaaatgca
gcgcaatactttgatcaacctaacggtttatttaaatggcataacgagttattacaacca
ctagaagcgctgattttaaatagcccaattgaggcgttaatcgatcacttaaccaatatg
agtaagcattatttacagctaaaagacggctaccccgacttaatggttatccataacggc
aaagtacattttgaagaagtaaaagccccaggcgacaagctaaggcgaaatcaattaacg
actatagataacttaaagagcagtggttttgaggtacatatagccgttgttaaatggttt
atagatcccaaccgcatttacagcgtagttgatttagaaacgacaggcgcattaaaaggc
ggtaacaaaataaccgaaattggcttagttaaagtacagcatggcaaagtaatcgatacc
tggactactttagttaacccacaacgacatatacccgggtttatcacgtcgctaaccggt
attagcgatagcatggtaagtaatgcgccagtatttgcagatatagtaaaacctttaatg
gctaaattagcgggaagcatttttgttgcgcacaatgttaactttgactacgggtttatt
aaaaaagagtgcgaaatggcaaaggtgccttttaaaatgcccaagttgtgcactgtggtg
gaatcgcgtaaagcctttgcgggcttaaagtcgtactcgttgggtaatttgtcaaagcac
tttaatttaaacttaaccagccatcaccgagcgcttgccgatgcaaccgccacagcgcag
ttgttactgttaattcaaaaatcacaaagctag
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