Pseudoalteromonas nigrifaciens: PNIG_a2861
Help
Entry
PNIG_a2861 CDS
T05271
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a2861 (phrB)
Enzymes [BR:
png01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PNIG_a2861 (phrB)
DNA repair and recombination proteins [BR:
png03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PNIG_a2861 (phrB)
Prokaryotic type
PNIG_a2861 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ASM54835
UniProt:
A0AAC9UGJ2
LinkDB
All DBs
Position
I:2627718..2629235
Genome browser
AA seq
505 aa
AA seq
DB search
MKEKINIVWFKRDLRLSDHQPLKNAFSNGLPTLLLYNFEPLLLEDAHYNERHWRFVYQSI
VELNNQLARFNACVYIFNLNMNDLLESLKAQFEIINIFSHQEIGLNNTFGRDKAIKAWCQ
HNHINWLESQTGAVIRGKKNRNNWNERWQQTMQAPIAVPNWKSIKTITLNNYQAPELPSA
YTQDHDSFQQGGPLHARQVMQSFFAERGKGYQKGISSPSLSQTHCSRLSPYLAWGNISLR
QVYQMAIDEYHSKHPDKRGWKRPLAAFVSRLHWHCHFMQKFESECSMEFLALNPGYHVFP
YRDDEHVKNDIGRWAQGQTGIPIIDACMRCLKATGYINFRMRAMLVSFVTHHLNISWQQA
SFPLANYFLDFEPGIHYPQIQMQASVTGINTIRHYNPIKQSEDQDPTGAFIKKWCPELEK
LPIEYLHQPWEQTPMEALFNDFKLGEDYPEPMLDLTAASKAARERLWQYRERADVKRAIG
SILKKHVGVTRTTTKVKNKTTNDGS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaataaacatcgtgtggtttaaacgtgatttacgtcttagcgatcatcaa
ccattaaaaaatgcatttagtaatggcttacctaccctattactttataactttgagcca
ttactgcttgaagatgcgcattacaatgagcgacattggcgttttgtatatcaatctata
gttgagttaaacaatcagcttgctcgttttaatgcctgtgtttatatatttaatttaaat
atgaacgatttacttgaatcgttaaaggcgcagtttgaaataataaatatttttagtcat
caagaaataggcttaaacaacacctttgggcgcgataaggcaataaaagcctggtgccag
cataatcacattaactggctagagtcgcaaacaggcgcggttattcgcggcaaaaaaaat
cgtaataattggaatgaacgctggcagcaaacaatgcaagcacctattgctgttcctaat
tggaagagtataaaaacaattaccctcaataactaccaagcgcctgagctgccaagcgct
tacactcaagatcacgacagctttcaacaaggcggcccgttgcatgcacgccaagtaatg
cagagcttttttgccgagcgcggtaaaggttatcaaaaaggaatatcgagcccaagttta
agccaaacccattgctctcggctttcgccttatttagcgtgggggaacattagccttagg
caagtgtatcaaatggcaattgatgaatatcactcaaagcaccctgataaaagaggctgg
aagcgcccacttgctgcgtttgtatcgcgcttgcattggcactgccactttatgcaaaag
tttgaaagcgaatgctctatggagtttttagcacttaatccgggttatcacgtatttccg
tatcgcgatgatgaacatgttaaaaacgatattggacgctgggcgcaaggtcaaacaggt
attcccattattgacgcttgcatgcgctgcttaaaagccaccggttatataaactttaga
atgcgcgccatgcttgtaagctttgtaacccatcatttaaatataagttggcagcaagca
agctttccactcgctaattactttttagattttgagcccggaattcactacccgcaaatt
caaatgcaggcctcggttactggcattaataccattaggcattacaacccaataaagcag
tcggaagatcaagatccaacaggcgcgtttattaaaaagtggtgccccgaacttgaaaaa
ctccctattgaatatttacaccagccttgggagcaaactcctatggaagcgctatttaac
gattttaagctaggggaagattaccccgagcccatgcttgatttaaccgcagcctcaaaa
gcagcgcgcgaacgtttatggcagtaccgcgagcgagcagatgttaaacgcgccataggg
agtattcttaaaaagcacgttggcgttacccgcactacaactaaagtaaaaaataaaacc
actaacgatggctcataa
DBGET
integrated database retrieval system
