Pseudoalteromonas nigrifaciens: PNIG_a3009
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Entry
PNIG_a3009 CDS
T05271
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic-acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00540
Lipopolysaccharide biosynthesis
png01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
PNIG_a3009 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
png01005
]
PNIG_a3009 (kdtA)
Enzymes [BR:
png01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PNIG_a3009 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
PNIG_a3009 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
PNIG_a3009 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
PNIG_a3009 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
png01005
]
Lipid A
PNIG_a3009 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
DACZ_N
Motif
Other DBs
NCBI-ProteinID:
ASM54963
UniProt:
A0AAC9XYP0
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All DBs
Position
I:2756533..2757816
Genome browser
AA seq
427 aa
AA seq
DB search
MARIFYSLALMIISPLIVFYLYVLRGKKNPGYRAHFKQRFGFVDKSLFANNNKPLLVHCA
SVGEVLAATPLIKAVQKAHPKLNILITCNTPTGREQIITQFKNTVACCYLPMDFPFATAR
FLKRVKPQALCILETELWPNLMASSRNRNIPVLVLNARLSEKSQQGYQKVAKLTHIIMRS
ITVLASHNKTDAKRFIELGLEPHKSKVTGSIKFDITPTQEQLTKVTALKQLYNLEQRFIW
VAGSTHPIEHEQVISAHKNLLEKQPNALLIIAPRHPEQFDKVADLLTQSTLSFSRRSNNN
YNNENVLLADTLGELQYLYGAANVSFIGGSLIRRGGHNPLESAAFSVGVISGVHTYNFDH
IYPELIKLKGAIVVDNADELTQQLIALNQNSKACQTLGKKAAQCVANNQGAIQKTLNIIN
QYLEPKP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcattttttattcactcgcattaatgattattagcccactaatcgtattttat
ttatatgtattacgcggtaaaaaaaacccaggttatagagcgcactttaaacagcgcttt
ggttttgtggacaagtctttatttgccaataacaataagccgctgctagtgcattgtgca
tctgtaggtgaggtactcgccgctacccccctgatcaaagcagtacaaaaagcgcaccct
aaattaaatatacttataacgtgcaacacccctactggtcgtgagcaaatcattacgcag
tttaaaaacacggtagcctgctgctacttacctatggactttccatttgcaaccgcccga
tttttaaaacgagtaaagccacaagccctgtgtattttagaaactgaactgtggcccaac
cttatggcaagtagtcgcaatagaaatattccggtacttgttttaaacgctcgcttgtct
gaaaaatcgcaacagggttatcaaaaagtagctaagctaacgcatattattatgcgctct
atcactgtattggccagtcataataaaactgacgccaaacgctttatagagcttggcctt
gagccacataaaagtaaagttacaggttcaataaaatttgatattacacctacccaagag
caactaactaaggtaactgcactcaaacagctttataatttagagcagcgctttatatgg
gttgcaggctccactcaccctatcgagcatgagcaggtaattagcgctcataaaaatcta
ttagaaaaacaacccaatgcgttactcataatagcgccgcgccatcctgaacagttcgat
aaggttgcagatttactaacgcaaagtacactgagttttagtcgtcgcagcaataataat
tataataacgaaaacgtcttgttagcagatacgcttggcgagctgcaatacttatatggc
gctgctaatgtgagctttattggcggcagtttaattcgccgtggtggccataatccactt
gaatcagctgcattttcagtgggcgttatcagcggggtgcatacctataactttgatcat
atttaccctgagcttataaagctcaaaggcgctattgtggttgataatgctgatgagcta
acacaacaacttatagcattaaatcaaaacagcaaagcatgccaaactttaggtaaaaaa
gcagcgcaatgcgtggccaataaccaaggtgctatacaaaaaacacttaacattattaat
caatatttagagcccaaaccgtga
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