Pseudoalteromonas nigrifaciens: PNIG_a3080
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Entry
PNIG_a3080 CDS
T05271
Name
(GenBank) hypothetical protein
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
png
Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:
png00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
png03000
]
PNIG_a3080
Transcription factors [BR:
png03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PNIG_a3080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ASM55025
UniProt:
A0AAC9XYE4
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Position
I:complement(2830852..2831646)
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AA seq
264 aa
AA seq
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MQLPQDWNEIKNFEIMPQPVIAKIEYAQLSREIPLHTHPKGQLILALHGYVTCEVATKMW
MVPTHSAIWIPANVEHSNRASDNAHLCHLFIDANLQGMPSTACTLTISPLIKELMLSLAS
NQQNYSLTGKTARLAQVLFDQLVDMPIQPLDFVLSKNSVIKNMSNQLISQPYSRKTLPQW
AQQFALTERTLARLIKKETGMTFGKWRTQLHIIIALQALSNQQSVQQVSELLGYESVSAF
ITMFKKVMKKSPMRYMSDLDVYQL
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttccccaagattggaatgaaataaaaaactttgaaatcatgccgcagccggtt
attgctaaaatagaatatgcccagcttagccgtgaaattccgctgcatactcatccaaaa
gggcagttaattttagccctgcacggttatgttacctgtgaagtggcaacaaaaatgtgg
atggtgcctactcatagcgccatttggatcccggcaaatgtagagcacagtaatagagca
tctgataatgcgcatttatgccacttatttattgatgcaaacttacaaggtatgccaagt
acagcctgtacattaaccattagcccattaataaaagagttaatgcttagtttggcaagt
aatcagcaaaactatagcttaacgggtaaaaccgcacggcttgcacaggtattatttgat
cagctggtggatatgccaattcaacctttagactttgtactatcaaaaaacagtgttatt
aaaaacatgagcaatcaacttattagccagccttatagccgtaaaacattgccacaatgg
gcacagcaatttgctttaactgaacgtactttagcgcggttaataaaaaaagaaaccggt
atgacctttggtaaatggcgcactcaattgcatattataattgcactgcaggcgttatct
aatcagcaaagtgtgcagcaggtatcggagctattaggttatgagtcggtgagtgcgttt
attactatgtttaaaaaagtaatgaaaaaatcgcccatgcgttacatgagcgatctggat
gtttaccagctataa
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integrated database retrieval system
