Pseudoalteromonas nigrifaciens: PNIG_a3281
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Entry
PNIG_a3281 CDS
T05271
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PNIG_a3281 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
png03019
]
PNIG_a3281 (recQ)
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a3281 (recQ)
Enzymes [BR:
png01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PNIG_a3281 (recQ)
Messenger RNA biogenesis [BR:
png03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PNIG_a3281 (recQ)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PNIG_a3281 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
HEM4
Motif
Other DBs
NCBI-ProteinID:
ASM55190
UniProt:
A0AAC9XYJ4
LinkDB
All DBs
Position
I:2990853..2992676
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AA seq
607 aa
AA seq
DB search
MNTLTPPSSSLVRTPEAVLKQVFGYSEFRDGQKTVIDAAINGQDSLVLLPTGGGKSVCYQ
IPALVLEGVTIVISPLISLMQDQVTQLQALGVKAAYINNSLAREEQQQVYQQLHQGLIKL
LYVAPEKVLQREFLERLSHLKISLFAIDEAHCVSHWGHDFRPHYFRLSELKQRFAHVPMM
ALTATADKATRFDIVEQLKLQQPYIHTGSFDRPNIRYTIEEKFKPMVQLLRYLKEQKSQS
GIIYCTSRKRVDDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGM
GINKPNVRFVLHYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDE
QRRRVEEQRFNAMASFAEAQTCRRQILLNYFSEYQREPCGNCDICLNPPKSFDGTLVAQQ
ALSCVYRAEQRFGLGYIVELLRGANTSRIRDNNHHQLSTYGIGKDKSSEFWLSILRQLIH
QGLLSQDITQGASLRLTEAARAILKSEYALQLAEPRLQAKHVYQDKLAQFNYDKKLFARL
RALRKELADADDVPPYVVFNDKTLAEMAQLMPTNDSEFLKVSGVGFTKLNKYGGEFLTAI
RNYLATN
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgaatacattaacaccaccctctagctcacttgtgcgcacccctgaagctgtactcaaa
caagtgtttggttatagtgaatttcgcgacggccaaaaaacggttattgatgcagccatt
aacggccaagattcgttggtattgctgccaaccggtggcggtaaatctgtgtgctatcaa
atacccgctttagtgcttgaaggggtaactattgttatttctccgctaatatcgctaatg
caagatcaggtaactcaactacaagcgctgggcgttaaagccgcatatataaataatagc
ttagcccgcgaagagcagcagcaggtataccaacaactccatcagggattaattaaacta
ctgtatgttgcccctgaaaaagtgctgcagcgcgagtttttagagcgcttatcgcattta
aaaatcagcttatttgctattgacgaagcgcattgtgtatcgcattgggggcacgatttt
agaccccattactttcgtttaagcgaattaaaacaacgctttgctcatgtacctatgatg
gcccttactgcaactgccgataaagccactcgttttgatattgttgagcaattaaagtta
caacaaccctatattcataccggcagctttgatcgccctaatattcgctacaccatagaa
gaaaaatttaaacctatggtgcaactgctgcgctatttaaaagaacaaaaaagccaaagc
ggcataatttattgcaccagccgtaagcgcgtagacgacatagccgaaaagttagccgac
gcgggacttaacgccgccgcctatcatgcaggtatgagtaacgagcagcgccaatttgtg
caaaccggctttgcccgcgacgatatacaaatagtggttgctacagtggcctttggtatg
ggtataaataaacccaatgtgcgctttgtattgcattacgatattcccaaaagcatagag
tcgtactatcaagaaactggccgcgctgggcgagatggacttgccgctgaggctataatg
tattttgatccggcagatataggccgcgtaagacgcttttttgaagatattgacgacgag
caacgtcgccgcgtcgaagagcagcgctttaatgccatggccagttttgccgaagcacaa
acctgccgtcgacaaatcctgcttaactattttagtgagtatcaacgtgagccatgcggt
aactgcgatatttgcttaaatccgcccaaaagctttgatggcactttagtagcgcagcag
gcactatcgtgtgtatacagagcagagcaacgctttggccttggatatattgttgagtta
ctacgcggtgcaaacaccagtcgtattcgcgataataaccatcatcaactcagcacctac
ggcattggcaaagacaaaagcagtgaattttggctaagtattttacgccaacttattcat
caaggcttattaagccaagatataacccaaggtgcatcactgcgtttaaccgaagccgcg
cgcgctattttaaaaagcgaatatgcgttgcaactcgcagagcctcgcctgcaagctaag
catgtttatcaagataaattagcccagtttaattacgacaaaaagctatttgctcgctta
agggcgctgcgaaaagagttagccgatgccgacgatgtaccgccgtacgtggtatttaac
gacaaaacgcttgcagaaatggcgcagctaatgccgaccaacgacagcgaatttttaaag
gtgtcgggtgttggctttactaaattaaataagtatggcggtgagtttttaactgcaatt
cgcaactaccttgctactaactaa
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