Pseudoalteromonas nigrifaciens: PNIG_a3454
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Entry
PNIG_a3454 CDS
T05271
Symbol
ssb
Name
(GenBank) single-strand DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03030
DNA replication
png03430
Mismatch repair
png03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PNIG_a3454 (ssb)
03430 Mismatch repair
PNIG_a3454 (ssb)
03440 Homologous recombination
PNIG_a3454 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
png03032
]
PNIG_a3454 (ssb)
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a3454 (ssb)
03029 Mitochondrial biogenesis [BR:
png03029
]
PNIG_a3454 (ssb)
DNA replication proteins [BR:
png03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PNIG_a3454 (ssb)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
PNIG_a3454 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
PNIG_a3454 (ssb)
Mitochondrial biogenesis [BR:
png03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
PNIG_a3454 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
SSB_1
Keratin_2_tail
Motif
Other DBs
NCBI-ProteinID:
ASM55348
UniProt:
A0AAC9UKG8
LinkDB
All DBs
Position
I:complement(3159126..3159860)
Genome browser
AA seq
244 aa
AA seq
DB search
MARGVNKVILVGNLGQDPEVRYMPNGNGVANITLATSDSYKDKNTGQMVDKTEWHRVVFF
GKLAEIVGEYCRKGSQIYVEGKLQTRKWTDPQGQEKYTTEIVVDGFTGQMQMLGSRGGDQ
QGGQQSGGYQGNQSQGGQQSGGYQNNQSQGGQQSGGYQSNQGQNNQQQGGYTPQQQSAPA
AQPQSAPAPQQNNQYQQPQGGFAPQQSSAPQQQGGFAPKPQNAPQGGASNPMEPTIDFDD
DIPF
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcggtgtgaacaaagtaattttggttggtaatttaggacaagatcctgaagta
cgttatatgcctaatggcaacggtgtagcaaatatcaccttagcaacttcagatagctac
aaagacaaaaacactggccaaatggttgataaaactgagtggcaccgtgtggtatttttt
ggcaagttagcagaaattgttggtgaatattgccgtaaaggttcacaaatttatgttgaa
ggtaaacttcaaacacgtaaatggactgacccacaaggccaagaaaaatacacgactgaa
attgtagttgacggttttaccggccaaatgcaaatgttagggagccgtggtggcgaccag
caaggtgggcaacaaagtggtggttaccaaggtaatcaatcacaaggcggacagcaaagt
ggtggttatcaaaataaccaatcacaaggcggccaacaaagtggtggttaccaaagcaac
caggggcaaaataaccaacagcaaggcggttatactccacaacagcagtctgcaccagca
gcacagccacagtcggctcctgcaccacaacaaaataaccaatatcagcagccacaaggt
ggttttgcaccacagcaaagcagtgcaccacaacagcaaggtggctttgctcctaaaccg
caaaatgctccacaaggcggcgcgtctaacccaatggaaccaaccattgattttgacgac
gacatacctttttga
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integrated database retrieval system
