Pseudoalteromonas nigrifaciens: PNIG_a3480
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Entry
PNIG_a3480 CDS
T05271
Symbol
priA
Name
(GenBank) primosomal protein N' (replication factor Y) (superfamily II helicase)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PNIG_a3480 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_a3480 (priA)
Enzymes [BR:
png01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PNIG_a3480 (priA)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PNIG_a3480 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
TrwB_AAD_bind
AAA_30
AAA_19
IFT52_GIFT
Motif
Other DBs
NCBI-ProteinID:
ASM55371
UniProt:
A0AAC9UKN6
LinkDB
All DBs
Position
I:3185762..3187948
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AA seq
728 aa
AA seq
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MYFVEVAIKVPLPRTFDYKVDSQLGEASAPLKPGMRVLVPFGNQRKVAVVLALKTTTEVP
ENKIKAIFEIIDDTPILSAEHIELLRFTARYYCYPLGETIHIALPSALRQGESPDKTSIN
MVALTEKGALLPSLKAKTQLNLLKQLSQSGKSSLTELKALGFSKKTIDSLIDKALITQSI
EHDNHWQSVAPTVGSKPTLNKEQAVACTTINQSSGFSSFLLEGVTGSGKTEVYLQCLEEV
LKRGEQALVLVPEIGLTPQTVNRFRRRFPDTPIMLWHSALTDNERLQTWRFCEKASCAIV
IGTRSSIFLPFLKLGMIVVDEEHDSSFKQQDTLRYHARDLAAYRAYQHKIPLILGSATPA
LETLHKAINNKYQLLSLTERAQTATDNQFKLLDMKGQPDQAGIAHASLATMRQHLKRGKQ
VMVFLNRRGFSPTLICHECGWLSECKRCSTSATFHKAIGQMICHHCGEQYHVPHQCPDCG
STQIFPNGKGTEQIEEFLSSEFPQTPVTRIDRDSTRRKGSLEKALDEINLGGARILVGTQ
MLAKGHHFADVSLVVILDVDSGLYSCDFRATEHLAQLVTQVAGRAGRSGEAGQVLLQTHF
PEHPLLQDLVNNGYQDFARFALREREDADLPPITNMAIVRAQGHNIKQVVDFLTDLVPVS
GVTGIQLLGPIPAPLEKVAGMYRFQLHIQAQDRRVLHQYLAQMVDYLSTSKLAQKVRWSL
DVDPIDMI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgttgaagttgctataaaagttccactaccgcgcacctttgattataaagta
gatagccagcttggtgaagcttctgcgccattaaaacccggaatgcgggtgttagtaccc
tttggtaatcaacgtaaagtagccgtggttttagcgcttaaaacaacaaccgaagtgcct
gaaaacaaaataaaggcaatttttgaaattatcgacgatacgccaattttatctgcagag
cacatagagttactgcgctttactgcccgttattattgctacccgctgggtgaaaccatt
catattgcattgccaagcgcactacgccaaggcgaatcgcctgataaaaccagcattaat
atggtagccctaacggaaaaaggcgcgctgctgccgtcattaaaagctaagactcaactt
aatttactaaagcagctatcgcaatcaggcaagtcgtcattaaccgagttaaaagctttg
ggctttagtaaaaaaaccattgatagcttaatagataaggcactcataacgcagtcaatt
gagcatgataaccactggcaaagtgtagccccaacagtgggtagcaaaccaacacttaac
aaagagcaagcggttgcctgcaccacaattaatcaaagcagcggttttagcagcttttta
ttagaaggtgtaaccggtagcggcaaaacagaagtgtacttacaatgtttagaagaagta
ctaaagcgcggcgaacaagcactagtattagtgcccgaaataggcttaaccccgcaaacc
gttaaccgctttcgccgccgctttcccgacacccccattatgctttggcattcagcttta
accgataatgaacgcttacaaacctggcgtttttgcgaaaaagccagctgcgccatagta
ataggcacacgttcgagtatttttctgccatttttaaagctcggcatgatagtggttgat
gaagaacatgactcgtcttttaaacagcaagacacgctgcgctaccatgcccgtgattta
gctgcgtatcgtgcatatcagcataaaattccgcttatattaggcagtgcaacaccggca
ctcgaaaccctgcacaaagcaattaataataaataccaactactgagccttactgagcgc
gcgcaaaccgctaccgataaccaatttaaattactcgatatgaaaggccagcccgaccaa
gcaggcattgcccatgccagccttgctaccatgcgccaacatttaaaacgtggcaaacaa
gtgatggtgtttttaaatcgtcgtggattttcgcccacgttaatttgccatgaatgtggc
tggttaagcgaatgcaagcgttgcagcaccagtgccacttttcataaagctattgggcaa
atgatttgccatcactgtggcgagcaatatcatgttccacaccaatgccccgactgcggt
agcacgcaaatttttcctaatggtaaaggcactgagcaaatagaagagtttttatcgagt
gaatttccacaaacccctgttacacgtatcgaccgcgactctactcgtcgtaaaggcagc
cttgaaaaagcactggatgaaataaacctaggcggcgcgcgcattttagtgggcacgcaa
atgttggctaaagggcatcactttgccgatgtaagtttagtggttattttagacgtagac
agcggcttatactcctgtgattttagagcaactgagcatttagcccaacttgttacgcaa
gtggccgggcgtgctgggcgctcaggtgaggcaggccaagtgttattgcaaacacatttt
cctgagcacccactattacaagatttggttaataatggttatcaggattttgctcgcttt
gcactgcgtgaacgtgaagatgcagacctaccaccaatcacaaatatggccattgttcgc
gcccaaggacacaatataaaacaagtcgtcgattttttgacagatttggttccagtaagc
ggggtaactggtatacaattgctcggtccaatacctgctcctcttgaaaaagtagcaggt
atgtatcgttttcaattacacattcaagcgcaagatcgccgcgtattgcaccaatatctt
gcgcaaatggttgattatctaagcactagcaaacttgcacaaaaagtacgctggagccta
gacgtagaccctatagacatgatttag
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