KEGG   Pseudoalteromonas nigrifaciens: PNIG_a3517
Entry
PNIG_a3517        CDS       T05271                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
png  Pseudoalteromonas nigrifaciens
Pathway
png03030  DNA replication
png03410  Base excision repair
png03420  Nucleotide excision repair
png03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:png00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PNIG_a3517 (polA)
   03410 Base excision repair
    PNIG_a3517 (polA)
   03420 Nucleotide excision repair
    PNIG_a3517 (polA)
   03440 Homologous recombination
    PNIG_a3517 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:png03032]
    PNIG_a3517 (polA)
   03400 DNA repair and recombination proteins [BR:png03400]
    PNIG_a3517 (polA)
Enzymes [BR:png01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PNIG_a3517 (polA)
DNA replication proteins [BR:png03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     PNIG_a3517 (polA)
DNA repair and recombination proteins [BR:png03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     PNIG_a3517 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PNIG_a3517 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Obc1_cap
Other DBs
NCBI-ProteinID: ASM55401
UniProt: A0AAC9UKS7
LinkDB
Position
I:complement(3224472..3227207)
AA seq 911 aa
MAQIPENPLILVDGSSYLFRAYHSPPHLTNSKGEATGAIYGVINMLKSLIRQYDPSHMVV
IFDAKGKTFRNDMYSEYKANRPPMPDDLRTQIAPIHRIIKAMGFPLISIEGVEADDVIGT
FARIASEQKRHVLVSTGDKDMAQLVNEHVTLINTMTDSISDPVTVVEKFGVGPELIIDYL
ALMGDKVDNIPGVEGCGPKTAVKWLEKYGSLQGVMDNASEIKGKIGEKLAAALDHLPLSY
QLATIKCDVEVESDLDTFKLQEPNKDELIALYGECEFRRWLAELLDNPKDTETHLAVPTE
ANEVPKVAEAQYETILTESQFDALIEQLNDAELFAFDTETTSLDYMQAQLVGMSFAVKAG
EAAYLPVAHDYPGAPEQLSLEFVMQKLGPILADAKKAKVGQNLKYDKSVLANAGYELNGI
KFDTMLESYVLNSVGTRHDMDSLALKFLGHKNISFEDIAGKGKKQLTFNQVELDKAGPYA
AEDADITLRLHQVLWPKLAADEKLKSVFEDIEMPLVNVISDIERTGVAIDSKMLAAHSQR
LGERLLELEKEAYEIAGEPFNLSSPKQLQVLLFERLELPIIKKTPKGAPSTAEEVLQELA
HDYPLPKVIIEHRGLSKLKSTYTDKLPLMVNEKTQRVHTSYHQAVTATGRLSSTDPNLQN
IPIRSEEGRRIREAFIAADGYKIVAADYSQIELRIMAHLSQDKGLLSAFANGLDVHSATA
AEVFGVSLEEVTSDMRRKAKAVNFGLIYGMSAFGLARQLDVPRHEAQHYIDKYFERFPGV
LEYMETTREKAAESGYVETIFGRRLYLPEIKAQNGARRKGAERAAINAPMQGTAADIIKK
AMLSVHSWVYEQAPNTVKLLMQVHDELVFEIKTDCVDAYTKHICELMSQAATLDVPLIVE
ADEGDNWEQAH
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggctcagatccccgaaaacccacttattttagttgatggctcttcatatttatttcgt
gcttatcattcaccgccacatttaactaactcaaaaggtgaagcgaccggagcgatatat
ggtgtgatcaacatgctaaaaagtttgatcagacaatatgatccctcgcatatggtggtt
atatttgacgctaaaggcaaaacctttagaaatgacatgtatagcgaatataaagcgaac
cgtccgccaatgccagatgacttacgcacgcaaatagcgccaatccaccgtattattaag
gcaatgggttttccgcttattagcattgaaggtgttgaagccgacgatgtaattggtacg
tttgcgcgcatagcttcagagcaaaagcgccacgtactggtttctaccggtgataaagat
atggcgcagttggtaaatgaacatgtaacgcttataaacaccatgaccgacagtatctcg
gatcctgttactgtagttgaaaagtttggtgtgggcccagagcttattatcgattattta
gctttaatgggcgataaagtagataacattccaggggtagaagggtgtggtcctaaaact
gcggttaagtggttagaaaaatacggatcgctacagggcgttatggataatgccagcgag
atcaaaggtaaaataggagaaaagttagcagctgcgctagatcatctgcctttaagctat
caacttgctactattaagtgtgatgttgaggttgagtcggatcttgatacctttaagtta
caagagcccaataaagatgagctaattgcgctttatggtgaatgtgaatttcgtcgttgg
ttagctgagttactcgataaccctaaagataccgaaacacacttagctgttcccactgag
gctaacgaagtaccaaaagtagcagaggcacaatacgaaactattttaaccgagagccag
tttgatgcattaatagagcagctaaatgatgctgagctatttgcctttgatacagaaaca
accagccttgattacatgcaagcacagttagtaggtatgagctttgcggtaaaagccggt
gaagctgcttatttacccgttgctcacgactatccgggtgcacctgagcaactaagcctt
gagtttgtaatgcaaaaattaggacctattctagccgatgccaaaaaagctaaagtaggg
caaaaccttaaatacgataaaagcgtattagcaaatgcgggttatgaattaaacggtatt
aagtttgataccatgcttgaatcgtatgtgcttaacagtgtgggtacgcgccatgatatg
gattcactggcacttaaatttttaggccataaaaatatcagctttgaagatattgctggt
aaaggtaaaaagcaacttacttttaatcaagtagagctagataaagccggcccctatgcc
gctgaagatgcagatattacgctgcgtttacaccaagttttatggccaaaattagccgct
gacgaaaaactaaaatcagtattcgaagatatagaaatgccactggttaatgttatttct
gatattgaacgcactggtgtagcaatagacagcaaaatgcttgctgcgcacagccaacgc
ttaggcgagcgtttattggagctggaaaaagaagcgtatgaaatagcgggtgaaccattt
aatttaagttctccaaaacaactacaagtattgttgtttgaaagactggaactgccaata
attaaaaaaacgcctaaaggcgcgccttctaccgcagaagaagtattacaagaattagcg
cacgactatccactgcctaaagtaattattgagcaccgtggtttatcaaagcttaaatca
acctataccgacaaattaccgttaatggttaacgagaaaacgcagcgtgtgcatacctcg
tatcatcaagccgtaacggcaactgggcgtttaagttcaaccgatcctaatttacaaaat
attccaattcgctcagaagaagggcgtcgtattcgtgaagcgtttatagcggccgatggc
tataaaattgtcgctgccgattatagccaaattgagctacgtataatggcgcatctttca
caagataaaggtttattaagtgcgttcgctaatggtttagacgtgcacagtgccactgca
gcagaagtatttggtgtaagtttagaagaagtgaccagcgatatgcgtcgtaaagctaaa
gcggttaactttggcttaatttatggcatgtcggcatttggtttagcacgccagctggat
gtgccacgccatgaagcgcagcattatattgataaatattttgagcgtttcccaggtgtt
ttagaatatatggaaacaacgcgtgaaaaggccgctgaaagcggttatgtagagactatt
tttggacgccgtttatatttaccagaaataaaagcccaaaatggtgcacgaagaaaagga
gctgagcgcgcagcaatcaatgcgccaatgcaaggcactgctgccgatatcattaaaaag
gcaatgttaagtgtacacagttgggtatacgagcaagctcccaataccgttaagctatta
atgcaagtacacgatgagttggtatttgaaattaaaacagactgtgttgatgcttacaca
aagcatatttgcgaactaatgtcgcaagcggctactcttgatgtaccacttatagttgaa
gctgatgaaggcgacaactgggaacaggctcactaa

DBGET integrated database retrieval system